Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_3295 |
Symbol | |
ID | 5755099 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 3886001 |
End bp | 3886963 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641289628 |
Product | auxin efflux carrier |
Protein accession | YP_001555717 |
Protein GI | 160876401 |
COG category | [R] General function prediction only |
COG ID | [COG0679] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0975873 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.0000962447 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGACCATTT TAACCCCTCT GTTTGCCGTC TTCGGGATCA TGTTGCTCGG CACACTAGTG CAAAAATTAA AACTCTTGCC CGTCGATACG GATCAAGTGC TAAACCAGTA TGTGTACTAT ATTGCGTTCC CTGCGATCAT GCTTATCGCC CTCGCCCAGC AGCCGATTGA TGAAATTTTG CAATGGGGAT TTATTGCGGG CTACAGCACG GCTATGGTGA TCACTTATCT TGTCTGCCTT GGGCTCTCGC TGCTTGCTAA CCCTAAACAG CATGCGGTTG CCGCCATTCG AGCCCTTAAT GCCACCTTTG GTAATACGGC ATTTATTGGT ATTCCACTGC TTATCATCTT ATTCCCGCAG CAGCAAAGTG CGTTAGTCGC TGCCGCGATT GCCAGCTTAT TATCCGTGCT GATGTTTGCC GTCGCCTTAG TCTCGATGGA ACTGGCCACT AACACCCAAA GACAACACCA CGCCTTAGTC ATAATGGCGA TGGCGGTCGG TAAAAACCCT ATTGTTATTG GTAGCTTGAT TGGCGTCGGC ATTTCGGCAC TAGAGATAAA ACTGCCTTCA GGGCTGGCGC TAATGATCCA GCAAATTGGC AATACCTCAA GCCCGTGCGC GCTGTTTGCC ATCGGTATGG TGCTCGCCAA AGCGATGCGC TACCAGAAAG ATAGCAGCGT ATTTAGCCCC AAGAATTTTA TTGAACTGAG CCTTATCAAC CTCTTCAAGC TAGTTGTCCA ACCGGCACTC GTCTACTTTA TGCTTAGCCG TTTTGGCGTG AGCGGCGACT ACCTGATCAT GGGCGTGATC TTGAGCGCAC TGCCCACAGC CGCTAGCGTG TACTTGCTCG CCCAGCGCTA TAACACTCAA GCTTCAACCA GTGCTCAGGG CATTCTATTT GGCACCTTAG TCACTTTTTT TAGTTTGCCT ATCTTAGAAA GCTTCGTAAG AACCTACGCA TAA
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Protein sequence | MTILTPLFAV FGIMLLGTLV QKLKLLPVDT DQVLNQYVYY IAFPAIMLIA LAQQPIDEIL QWGFIAGYST AMVITYLVCL GLSLLANPKQ HAVAAIRALN ATFGNTAFIG IPLLIILFPQ QQSALVAAAI ASLLSVLMFA VALVSMELAT NTQRQHHALV IMAMAVGKNP IVIGSLIGVG ISALEIKLPS GLALMIQQIG NTSSPCALFA IGMVLAKAMR YQKDSSVFSP KNFIELSLIN LFKLVVQPAL VYFMLSRFGV SGDYLIMGVI LSALPTAASV YLLAQRYNTQ ASTSAQGILF GTLVTFFSLP ILESFVRTYA
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