Gene Sbal195_3295 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_3295 
Symbol 
ID5755099 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp3886001 
End bp3886963 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content49% 
IMG OID641289628 
Productauxin efflux carrier 
Protein accessionYP_001555717 
Protein GI160876401 
COG category[R] General function prediction only 
COG ID[COG0679] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0975873 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000962447 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACCATTT TAACCCCTCT GTTTGCCGTC TTCGGGATCA TGTTGCTCGG CACACTAGTG 
CAAAAATTAA AACTCTTGCC CGTCGATACG GATCAAGTGC TAAACCAGTA TGTGTACTAT
ATTGCGTTCC CTGCGATCAT GCTTATCGCC CTCGCCCAGC AGCCGATTGA TGAAATTTTG
CAATGGGGAT TTATTGCGGG CTACAGCACG GCTATGGTGA TCACTTATCT TGTCTGCCTT
GGGCTCTCGC TGCTTGCTAA CCCTAAACAG CATGCGGTTG CCGCCATTCG AGCCCTTAAT
GCCACCTTTG GTAATACGGC ATTTATTGGT ATTCCACTGC TTATCATCTT ATTCCCGCAG
CAGCAAAGTG CGTTAGTCGC TGCCGCGATT GCCAGCTTAT TATCCGTGCT GATGTTTGCC
GTCGCCTTAG TCTCGATGGA ACTGGCCACT AACACCCAAA GACAACACCA CGCCTTAGTC
ATAATGGCGA TGGCGGTCGG TAAAAACCCT ATTGTTATTG GTAGCTTGAT TGGCGTCGGC
ATTTCGGCAC TAGAGATAAA ACTGCCTTCA GGGCTGGCGC TAATGATCCA GCAAATTGGC
AATACCTCAA GCCCGTGCGC GCTGTTTGCC ATCGGTATGG TGCTCGCCAA AGCGATGCGC
TACCAGAAAG ATAGCAGCGT ATTTAGCCCC AAGAATTTTA TTGAACTGAG CCTTATCAAC
CTCTTCAAGC TAGTTGTCCA ACCGGCACTC GTCTACTTTA TGCTTAGCCG TTTTGGCGTG
AGCGGCGACT ACCTGATCAT GGGCGTGATC TTGAGCGCAC TGCCCACAGC CGCTAGCGTG
TACTTGCTCG CCCAGCGCTA TAACACTCAA GCTTCAACCA GTGCTCAGGG CATTCTATTT
GGCACCTTAG TCACTTTTTT TAGTTTGCCT ATCTTAGAAA GCTTCGTAAG AACCTACGCA
TAA
 
Protein sequence
MTILTPLFAV FGIMLLGTLV QKLKLLPVDT DQVLNQYVYY IAFPAIMLIA LAQQPIDEIL 
QWGFIAGYST AMVITYLVCL GLSLLANPKQ HAVAAIRALN ATFGNTAFIG IPLLIILFPQ
QQSALVAAAI ASLLSVLMFA VALVSMELAT NTQRQHHALV IMAMAVGKNP IVIGSLIGVG
ISALEIKLPS GLALMIQQIG NTSSPCALFA IGMVLAKAMR YQKDSSVFSP KNFIELSLIN
LFKLVVQPAL VYFMLSRFGV SGDYLIMGVI LSALPTAASV YLLAQRYNTQ ASTSAQGILF
GTLVTFFSLP ILESFVRTYA