| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_2932 |
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| Symbol | |
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| ID | 5754710 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | + |
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| Start bp | 3476761 |
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| End bp | 3477717 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641289243 |
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| Product | integrase family protein |
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| Protein accession | YP_001555358 |
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| Protein GI | 160876042 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.426085 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATTA CTAAAGTTGA TGGCGGCTAC CGTGTTGATA TTCGCCCCTC TGGCCGCAAT
GGTAAACGTT ATCGACGCAC GTTTGAGACC AAAACCGAAG CGACAAAATA TGAGAAGTTC
ATATTGTCGC AGCACCATAA TAAAGACTGG CTCGACGCGC CTATCGACAG GCGCCCATTA
TTGGAACTGA TTGACCTTTG GTTTCACTTT CACGGCAAAA ACTTAAAAGA AGGCGTAAAT
ACACGTAAAA ATTTAATCAC GACTTGCAAG CTAATGGGCA ACCCGCAAAG CCACCAAGTT
AACACTAATT TTTACTTAAA TTATCGGGCG CGACGACTCG AAAAGATCAC ACCTAAAACC
GCCAATCTTG AACTCACCCG CCTGCAAGGC GTGTATAGCG TATTAATTGC CGCAGGGGAA
TTTGCTGGCG AGCACCCGCT AAAGTCAGCG CCACCGATAA AGTTACAAGC AAAAGATCAG
TCGTTTTTAA CCAAACCACA AATTGCACAG CTTCTAGCGC TATTATCTGG TGAGATGCTG
CTTATTGTAA AAATTTGCCT TAGCACGGGT GCCCGATGGA GCGAAGCGCA AAACCTAACA
AGCTCGCAGC TATTGGATGA CCGGATTAAC TTTATTAACA CCAAGAACGG CAAAAACCGA
ACTATCCCCA TCACGCGAGA GTTTCGCGCA GAACTCCCTA ACGGTAATGG CCGCCTCTTT
ACTGATTGTT ATCACCAGTT TCTTGCAGTG CTTAAGTCAT CCGGTATCGA GCTCCCCAAA
GGCCAAGCGA GCCACGTTTT AAGACATACG TTTGCATCCC ATTTTGTGAT GAACGGCGGC
AACATTCTCA CGCTGCAAAA AATCCTAGGA CACGGTTCAA TTCAGATGAC GATGCGTTAT
GCGCACCTAG CACCAGACCA CTTGCAAGAA GCCACAAGGT ATAATCCACT GGTTTGA
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| Protein sequence | MSITKVDGGY RVDIRPSGRN GKRYRRTFET KTEATKYEKF ILSQHHNKDW LDAPIDRRPL
LELIDLWFHF HGKNLKEGVN TRKNLITTCK LMGNPQSHQV NTNFYLNYRA RRLEKITPKT
ANLELTRLQG VYSVLIAAGE FAGEHPLKSA PPIKLQAKDQ SFLTKPQIAQ LLALLSGEML
LIVKICLSTG ARWSEAQNLT SSQLLDDRIN FINTKNGKNR TIPITREFRA ELPNGNGRLF
TDCYHQFLAV LKSSGIELPK GQASHVLRHT FASHFVMNGG NILTLQKILG HGSIQMTMRY
AHLAPDHLQE ATRYNPLV
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