| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_2900 |
|---|
| Symbol | |
|---|
| ID | 5754678 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | - |
|---|
| Start bp | 3450423 |
|---|
| End bp | 3451352 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641289211 |
|---|
| Product | baseplate J family protein |
|---|
| Protein accession | YP_001555326 |
|---|
| Protein GI | 160876010 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3948] Phage-related baseplate assembly protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.687314 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGAGC TCATTGACCT TTCTAAAGTT CCTGTGCCTG ACATTATCCA GCCGCTGAGC
TTTGAGCAGC GCTTTGCTGC GCTCAAGCAA TTATTGATTG ATATCGACGA AAGCTATCAG
GCTGTGGTGG CACTAGAGTC TGACCCTATT ACCAAATTAC TGCAGGTATT TGCCTATCGT
GAAATGCACT TGGTTGCGCA AATTAATGAT GCCACCCGCG GCAATATTTT AGCCTCATCA
ACGGGTAATA ACCTGATTGC ACTCGGCTCG CGTTATGACC TAGCACCACT CGTTATTCAG
GCCAGTGACG ACAGCTCAGT GCCACCCATC CCTGAAATTC TAGAGGATGA GCAATCCTTT
AAGCGCCGCG TGCAAATGGC GTTTGATGGC TTAAATACGG CTGGCAGTAT TGACGGTTAC
ATTTTTTTCG CCTTGGGCGC AGATGGCCGC GTGGCAGATG CTAAAGCCGT GAGCCCTGAT
CCATGCGAAA TGGTGGTAAC CGTTCTTTCT ATCGATGGAA ATGGCTCAGC AAGTGATGAA
TTACTCTCTA AGGTTAGGGT CGTTTTTGGC TTAAGTGCCG ATGGATTATC CCAGTCCAGC
ACGCCATCTA AGGTGAGGCC GCAGGGCGAT AGAGTGACTA TTCAGGGCTC TGGCATTGTT
AATTACAGTG TGCAAGCCGT GTTACAGCTG TTGCCGGGGC CCGATGCGCA AGTAGTGTTA
GCTGCTGCTA ATCAAGCTTT AGCACTCTAC CAAAAGGAGC AGCGCCGTTT GGGGGCTGAT
ATTACCCGTT CAGGAATATT CAAATCGCTG CACCAAAGTG GTGTCAATAA CGTCAATCTG
ATTAGTCCAT CCGCTGATGT AACCGTGCTT GATCATCAAG CGGCATATTG CACCAGCGTT
AATATTTCGA TTGGGGGTGT AGGTGAATAA
|
|---|
| Protein sequence | MAELIDLSKV PVPDIIQPLS FEQRFAALKQ LLIDIDESYQ AVVALESDPI TKLLQVFAYR
EMHLVAQIND ATRGNILASS TGNNLIALGS RYDLAPLVIQ ASDDSSVPPI PEILEDEQSF
KRRVQMAFDG LNTAGSIDGY IFFALGADGR VADAKAVSPD PCEMVVTVLS IDGNGSASDE
LLSKVRVVFG LSADGLSQSS TPSKVRPQGD RVTIQGSGIV NYSVQAVLQL LPGPDAQVVL
AAANQALALY QKEQRRLGAD ITRSGIFKSL HQSGVNNVNL ISPSADVTVL DHQAAYCTSV
NISIGGVGE
|
|---|
| |