| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_2842 |
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| Symbol | |
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| ID | 5754620 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | - |
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| Start bp | 3385876 |
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| End bp | 3386640 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641289153 |
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| Product | tRNA/rRNA methyltransferase (SpoU) |
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| Protein accession | YP_001555268 |
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| Protein GI | 160875952 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0219] Predicted rRNA methylase (SpoU class) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.002241 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000781436 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTTGCCTA GCGTTATGCC TATGACTGAC AACGAGCAAG TGACTAATAC TGCAGTGACT
AGTACCGAAG TAACGAGTAC AGAAATGCCG AGTGCTGAAT TTGCCTGTGA GCAAACGCTC
GATGCCAGCG CAGTATTTAT CGGTTTAGTG AATCCTAAAA CGCCCGTTAA CGTCGGCGGT
ATTATGCGCG CATCGGGTTG TTATGGTGTC GATGGGGTAT TTTATACCGG CAGGCGCTAC
GAGTTAGCCG CGCGTTCGGG TGCTGTGCAA TACCATGTCG ATACTAAGGA TGCAGGAGAG
CGCATTCCGC TCACGGGCGT GACTTCATTA CTCGCCTCGA TTCCGGCGGA CACTAAGCTT
ATCTGTGTGG ATTTGGTAGT TGGCGCGACG CCGCTGCCGG ATTTTGTCCA TCCCGCGAAA
GCCTTTTATG TGTTTGGTCC TGAAGATGGC ACCATTGGCC AAGAGATTAT CGATAAAGCC
GATGCCGTAG TGTATGTGCC TACGGTCGGT TGTATGAATC TTGCTGCGTC GGTCAATGTG
TTGTTATACG ACAGATTGGC GAAATCTCAC CGTGAGGCTG CAAGCCTAGC ATCGAACATA
AGCGGTGATG AGCTGATCCG CCAGAGTCGC GATAACAACA ATCGTACTCG GGTAAAAGTG
CCCAGAGCGC CGCGAAAACC TCGACATGTT GGAGCTAGCA GTCTTGAGTC TAGCAGCCTT
GAACCTAGCC GCAGTGATAA CGCGATAGTC ATTACAGCCG CTTAA
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| Protein sequence | MLPSVMPMTD NEQVTNTAVT STEVTSTEMP SAEFACEQTL DASAVFIGLV NPKTPVNVGG
IMRASGCYGV DGVFYTGRRY ELAARSGAVQ YHVDTKDAGE RIPLTGVTSL LASIPADTKL
ICVDLVVGAT PLPDFVHPAK AFYVFGPEDG TIGQEIIDKA DAVVYVPTVG CMNLAASVNV
LLYDRLAKSH REAASLASNI SGDELIRQSR DNNNRTRVKV PRAPRKPRHV GASSLESSSL
EPSRSDNAIV ITAA
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