Gene Sbal195_1839 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_1839 
Symbol 
ID5753582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp2202780 
End bp2203955 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content38% 
IMG OID641288120 
Producthypothetical protein 
Protein accessionYP_001554270 
Protein GI160874954 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0738] Fucose permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.157174 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.968592 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAATA AAATTACTTT AACAGCCATC AGTTTTCTCG CCAATTTTAT TATGGCGGGC 
TTTGCGACCC AATTTGGAAT GTTGATTGAA CCCATAGCTG AGAAATTTGC TGCTAATGTT
AACGAAGTTG CATCAATCTT TTCATTGCTC AATGGTGGTG CACTCGCGGG GACGATTGCA
GCATTTTTCT TTATTGAAAA AATGGGTATC AAAAGAATGA CCTTGATAAG TTACAGTCTG
GTTGCTCTTT CTGCTCTGGC TTTACATCTA ACCAATTCCC TACAAGTTGT GATGGTGGCA
ATGACCTTGA TTGGTTTTTG TGGCGGTATC GGTCTATGTA TTGCTGGTAC GATTGTGGTG
TCTGTGTGGC AAGAGAAATT ACAAAGCACA ATGTTAGTAG TGCAGGATGC GACTTTTAAT
ATTGCAGGTG TTATTTTTCC ATTGATAACA ACTTATGCAT TAACAAGCTC ACTATCATGG
AGTTATAGCT ATTTAGCTGT AGGTTTGGTC GCGTTAGGTA CCGTCATTAT TACATTATTC
ACTAATTTTT CTATATGTGA GCAGTCTTCT TCAACAGAAG ATAAGCAACA ATCTGAGTGG
AATCTTGGAA TTATTAGCGG GGGTATTGGA TTATTTTTAG GGATGCTCGC ATTATATACA
TTTTTAACTT GGGCACCTTT ATTTGTAAAA CAAAAATTTG ATATTCCGTT TGAAGAGGCG
GGTAATATTA TTACCCAGTA TTGGTCCGCT GCGCTAATTG GTGCCCTAAT TTCGACTGTG
ATTGTGACTC GTGTAAAAAT TCACCATTTC TTAGTTGGTA TTATTGCTTT AGCTATGGTG
ATCACCGCTG CCATTGTCAG TACCAATAAT CTTAATTGGA TAGCTTATTT AACCTATGGT
TACGGTTTTG TGTGTGCCGC GCTTTATAAT GCATTTATTG CTTATGGCGT GTCTTTTGTA
AAAAAAGCCA GCAGCAAAAA TGTGTCATAT ATTCTTATTA GCGGAAGCGC AGGGGCGATG
TTTAGCCCAG CCATCAGTTC TTTCTTTGAA CGTATTATCG GATTACAAAC AGTGATGTAT
GTGATACCTC TGCTTTACGC AGCGATATTT ATGCTATTGA TCGTTTCAAG TCGGATGAAA
TCGGCTATGG AACAACACTC GCCATCGGTA AGTTAA
 
Protein sequence
MNNKITLTAI SFLANFIMAG FATQFGMLIE PIAEKFAANV NEVASIFSLL NGGALAGTIA 
AFFFIEKMGI KRMTLISYSL VALSALALHL TNSLQVVMVA MTLIGFCGGI GLCIAGTIVV
SVWQEKLQST MLVVQDATFN IAGVIFPLIT TYALTSSLSW SYSYLAVGLV ALGTVIITLF
TNFSICEQSS STEDKQQSEW NLGIISGGIG LFLGMLALYT FLTWAPLFVK QKFDIPFEEA
GNIITQYWSA ALIGALISTV IVTRVKIHHF LVGIIALAMV ITAAIVSTNN LNWIAYLTYG
YGFVCAALYN AFIAYGVSFV KKASSKNVSY ILISGSAGAM FSPAISSFFE RIIGLQTVMY
VIPLLYAAIF MLLIVSSRMK SAMEQHSPSV S