Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_1775 |
Symbol | |
ID | 5753511 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 2127699 |
End bp | 2129105 |
Gene Length | 1407 bp |
Protein Length | 468 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641288049 |
Product | diguanylate cyclase |
Protein accession | YP_001554206 |
Protein GI | 160874890 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.319637 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGACATT CGGCACTCAA CTGGTTGTTA TTACGTCGGT CACTTGCACT TGCGACCCTC TTGTTTGTCA TATTCTTGCT GATCCTATTG CCGTTTAAAA TCGATAGAGA ACACCAATCC TTTGTGTCTT TTGTAAAAAC AAAGCAAATC ACACCGAGCT ATATTGAACT GCTCGGTAAA AGCTTATCCC TGCACGATAT CATTGATTTC AATAAATCTT CTTTAGCGCC TTTTCAGCTC GATCCCACCC GATTAATGCT GCCCCAAGGG GTGGAGCTTT CTGCTGAAGA AGCGCAAGTC TTACGCTACT TTGATTATCT CTACTCCAGT AAAAAGACAA ATGCAGAAGA TATTTTCCTG TATGTGGGGC TTTATCGTAG TGATGCTGTG TATTTTGCAA CCCCAATCCC AGAGGACGTA AAAGCGCGGC TGATTAATGA CCGTACTTCG ACAAATGAGT TTTGTCAGAG CCTGCACTAT TGTGCGAAAG ACGCGACGCC AGAGTCCTTG GCCGATGGCA TAGTGTTATC CATTCCTTAT CAAGATGAAG TGACTGGTAA AGTCATTTTA TCTATGGCCT CGCCGATTAC ATCATCTAGC GATCCTAATC ATTTTATTGG TGATGTGATT GCCGACACGG CCTTTATGAC GTCGGGTTTT ATGCGTAATA AACATGTGGA ATGGCAGAAT ACAGATTATG GCACTGAGCT GGTGATCACG ACAGATAGCC TTTGGGCTGA ACTGACGCCG GAGTTCTTGT TTTATTCGAT GACAAATCAT TTAGATAACA TGACTTCACT GACATACAAA ATCAGTATAT TTCGTTTTAT TGTGTGGAAT TTGCCCCTGT GGTTTTTGTT ATCTATCGTG ATCTTCTTCG TTCAAATTAA TATCAATCGT CTTAGGAAAC TTCGTACTGA GCGCCAACGG TTTAGTGAAG CGATGTTATT GGATGCTTTT ACTCGCACCT ACAATAAGAA AGTCTATGAG ACCACGCTGT TTGATGTCGC AACTAAGGGG CATTACGCTG TGATCTGTGT GGATGGCGAT AAAATCAAAA CCATTAATGA TACCTACGGG CATAAACTCG GGGACATGGC GATCATGCAA ATTGTCGATG CAATGCGCGG CGTATTTCGA GAAAACGATT TGTTAATCAG AACCGGCGGT GATGAGTTTG TCGTCATCTT AGCTAATTGT ACTTTTGAAC GGGCTTTGGT ATTGGCTGAA CATTTACGTC AAGCGGTCGC AGAGCGGCAG TTTTTAAATG TGTTGACCGT TTCCTGCGGT GCCGCTGATT CCCAAGACTA TGCAAACTTT GAGGCCGTGC TGCAAGCGGC GGATAAAGCG CTGTATGAGG ATAAAAAGAA TAAGCAGGGT AGCCGTAAGC TCGAAGCGAC ACGGTAA
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Protein sequence | MGHSALNWLL LRRSLALATL LFVIFLLILL PFKIDREHQS FVSFVKTKQI TPSYIELLGK SLSLHDIIDF NKSSLAPFQL DPTRLMLPQG VELSAEEAQV LRYFDYLYSS KKTNAEDIFL YVGLYRSDAV YFATPIPEDV KARLINDRTS TNEFCQSLHY CAKDATPESL ADGIVLSIPY QDEVTGKVIL SMASPITSSS DPNHFIGDVI ADTAFMTSGF MRNKHVEWQN TDYGTELVIT TDSLWAELTP EFLFYSMTNH LDNMTSLTYK ISIFRFIVWN LPLWFLLSIV IFFVQININR LRKLRTERQR FSEAMLLDAF TRTYNKKVYE TTLFDVATKG HYAVICVDGD KIKTINDTYG HKLGDMAIMQ IVDAMRGVFR ENDLLIRTGG DEFVVILANC TFERALVLAE HLRQAVAERQ FLNVLTVSCG AADSQDYANF EAVLQAADKA LYEDKKNKQG SRKLEATR
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