Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_1239 |
Symbol | |
ID | 5752967 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 1475718 |
End bp | 1477442 |
Gene Length | 1725 bp |
Protein Length | 574 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641287509 |
Product | chloride channel core |
Protein accession | YP_001553674 |
Protein GI | 160874358 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0038] Chloride channel protein EriC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.675776 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCAATTAA CGATAAATAA AGTCGCTATT CAACATGCCA TAGTCACAGC CAAAAAGTAT TTAACCAATG AGCTACGTGA CCATTTATCC CAAGCGAGGA TCAGTGCACA ACTGTGCATA CTGGCACTGC TGTTTGCCAT TTTCGCATCC TGCGTGATCT TACTGTTTCG ACTTTTGCTC GTTTGGGCCA ATCATTACAC CCAAATACAG GCGCTGGATT TTACGGGGAA CGTCGCCGAC TGGCGAGCCC TGTTACCACT TTTAGGCGCA ATATTAATTT GGATTGTGGC TAAGCTGGGC TCCAAACGTT ATAAACGCAT GGGAATAGCC TATGTGTTAC ATAGAGTTAA ACTGCACTAC GGTAAAATTC CGTTGCAATC TGCCGTAGGG CAATTTTTTC AAGCATTATT CGCCCTCGGC ACCAATTTCT CCGTCGGCCG TGAAGGTCCA GCCATTCATC TGGGTGCTGT CAGTGCCAGC TTTCTCGCCG AAAAATTCAA TCTTCCCGAT AACAGTGTGC GCATTATGTG CGCCAGTGGC ATTGCAGCAG GGATTGCCGC GACATTTAAC GCGCCCTTGG CGGCAGTGAT TTTTGTTCTC GAAGTGATTG TCCGCGAATA TAAAGTCCAT TACTTCTTCC CGATTATGCT CTCCGCAATT TGTGGCGCGG TTTCAAGCCA ATTAGTGTTT GGTAATGTGC ACGAATTTGA CCGTATTCAA GTGATCCACA TTCCCTTAGA TCACTACCCT ATTCTCGCCA TCGGCGGCGT GGTATTAGGC TGCGCTGCGG CGCTGTTTAA TTACTCACTC TTAAAAGTCA CCGCGACGGG GCAAAACTGG CCACTCATCT ACCGACTATT ATTGGCGGGC AGCGTCACCA CCTTAATCGG TCTTGTGTTG CCTCAAGCCC TTGGCACGGG CGATCTCGCC ATTAGCGAAG CCATTAGTCA ACATCCAAGC CTGTTGCTGT TAATCGCCCT ATTATTTGCC AAAATCATTG CCACTATTGC AGCGATTGGC TTAGGTATTC CAGGTGGTTT GATTGGTCCA CTCTATGGCA TCGGCGCGCT GCTTGGCGCG ATTTTGGCGC TGATCAGTGC CATCTTATTC CCGTCCATCG CCCCTTATGT AGGGCTTTAC ACTGTGATCG GCATGACAGC CATGATGGGC GTGTGCTTAA GCGCGCCGCT GGCGGCGTTA GTCGCCCTGC TAGAAATGAC CAATGATGCC AGTATTATCC TGCCGGCGAT GTTTGTGACT ATTCCCGCAT TTTTGATTGC CTATCAAGGT TTTAAGACTA ACTCTATTTT CTTTAAACAA TTAGAAATCA TGGGGCTAGG CTATAAAGTT GCGCCAGTAA ATTTAGCGCT GCAGAAAAAA GGCGTGCGAG CCTTGATGGA TAAACGCTTT GTTATCGTCA ATAACAACGA TGAATTGTTA CTCGAAGTGC TTAAACGGGC CGAAGGTCGA CCTGTGCTGG TTCGCAATGC CGATGGCGTT ATCGAAATGC TCAGCCTTGA AATGCAATCC TACGATGACA GTACCACGCT ATCGCGCCAT CCCATGCAAG GCTTAAGCGA CAGCACCACG CTCAATGAGA CCTATTTACT CTTGTCACCC AAGCGCAGCG GTGAGGTGTT TATCTATCAA GATACGCCCG ATAACGTGGT CGGAGTGATC AGTTGGTCGA ACCTGCAACA GGAAATTCGC TTAGGCCAAG CCTAG
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Protein sequence | MQLTINKVAI QHAIVTAKKY LTNELRDHLS QARISAQLCI LALLFAIFAS CVILLFRLLL VWANHYTQIQ ALDFTGNVAD WRALLPLLGA ILIWIVAKLG SKRYKRMGIA YVLHRVKLHY GKIPLQSAVG QFFQALFALG TNFSVGREGP AIHLGAVSAS FLAEKFNLPD NSVRIMCASG IAAGIAATFN APLAAVIFVL EVIVREYKVH YFFPIMLSAI CGAVSSQLVF GNVHEFDRIQ VIHIPLDHYP ILAIGGVVLG CAAALFNYSL LKVTATGQNW PLIYRLLLAG SVTTLIGLVL PQALGTGDLA ISEAISQHPS LLLLIALLFA KIIATIAAIG LGIPGGLIGP LYGIGALLGA ILALISAILF PSIAPYVGLY TVIGMTAMMG VCLSAPLAAL VALLEMTNDA SIILPAMFVT IPAFLIAYQG FKTNSIFFKQ LEIMGLGYKV APVNLALQKK GVRALMDKRF VIVNNNDELL LEVLKRAEGR PVLVRNADGV IEMLSLEMQS YDDSTTLSRH PMQGLSDSTT LNETYLLLSP KRSGEVFIYQ DTPDNVVGVI SWSNLQQEIR LGQA
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