Gene Sbal195_1239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_1239 
Symbol 
ID5752967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp1475718 
End bp1477442 
Gene Length1725 bp 
Protein Length574 aa 
Translation table11 
GC content49% 
IMG OID641287509 
Productchloride channel core 
Protein accessionYP_001553674 
Protein GI160874358 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0038] Chloride channel protein EriC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.675776 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAATTAA CGATAAATAA AGTCGCTATT CAACATGCCA TAGTCACAGC CAAAAAGTAT 
TTAACCAATG AGCTACGTGA CCATTTATCC CAAGCGAGGA TCAGTGCACA ACTGTGCATA
CTGGCACTGC TGTTTGCCAT TTTCGCATCC TGCGTGATCT TACTGTTTCG ACTTTTGCTC
GTTTGGGCCA ATCATTACAC CCAAATACAG GCGCTGGATT TTACGGGGAA CGTCGCCGAC
TGGCGAGCCC TGTTACCACT TTTAGGCGCA ATATTAATTT GGATTGTGGC TAAGCTGGGC
TCCAAACGTT ATAAACGCAT GGGAATAGCC TATGTGTTAC ATAGAGTTAA ACTGCACTAC
GGTAAAATTC CGTTGCAATC TGCCGTAGGG CAATTTTTTC AAGCATTATT CGCCCTCGGC
ACCAATTTCT CCGTCGGCCG TGAAGGTCCA GCCATTCATC TGGGTGCTGT CAGTGCCAGC
TTTCTCGCCG AAAAATTCAA TCTTCCCGAT AACAGTGTGC GCATTATGTG CGCCAGTGGC
ATTGCAGCAG GGATTGCCGC GACATTTAAC GCGCCCTTGG CGGCAGTGAT TTTTGTTCTC
GAAGTGATTG TCCGCGAATA TAAAGTCCAT TACTTCTTCC CGATTATGCT CTCCGCAATT
TGTGGCGCGG TTTCAAGCCA ATTAGTGTTT GGTAATGTGC ACGAATTTGA CCGTATTCAA
GTGATCCACA TTCCCTTAGA TCACTACCCT ATTCTCGCCA TCGGCGGCGT GGTATTAGGC
TGCGCTGCGG CGCTGTTTAA TTACTCACTC TTAAAAGTCA CCGCGACGGG GCAAAACTGG
CCACTCATCT ACCGACTATT ATTGGCGGGC AGCGTCACCA CCTTAATCGG TCTTGTGTTG
CCTCAAGCCC TTGGCACGGG CGATCTCGCC ATTAGCGAAG CCATTAGTCA ACATCCAAGC
CTGTTGCTGT TAATCGCCCT ATTATTTGCC AAAATCATTG CCACTATTGC AGCGATTGGC
TTAGGTATTC CAGGTGGTTT GATTGGTCCA CTCTATGGCA TCGGCGCGCT GCTTGGCGCG
ATTTTGGCGC TGATCAGTGC CATCTTATTC CCGTCCATCG CCCCTTATGT AGGGCTTTAC
ACTGTGATCG GCATGACAGC CATGATGGGC GTGTGCTTAA GCGCGCCGCT GGCGGCGTTA
GTCGCCCTGC TAGAAATGAC CAATGATGCC AGTATTATCC TGCCGGCGAT GTTTGTGACT
ATTCCCGCAT TTTTGATTGC CTATCAAGGT TTTAAGACTA ACTCTATTTT CTTTAAACAA
TTAGAAATCA TGGGGCTAGG CTATAAAGTT GCGCCAGTAA ATTTAGCGCT GCAGAAAAAA
GGCGTGCGAG CCTTGATGGA TAAACGCTTT GTTATCGTCA ATAACAACGA TGAATTGTTA
CTCGAAGTGC TTAAACGGGC CGAAGGTCGA CCTGTGCTGG TTCGCAATGC CGATGGCGTT
ATCGAAATGC TCAGCCTTGA AATGCAATCC TACGATGACA GTACCACGCT ATCGCGCCAT
CCCATGCAAG GCTTAAGCGA CAGCACCACG CTCAATGAGA CCTATTTACT CTTGTCACCC
AAGCGCAGCG GTGAGGTGTT TATCTATCAA GATACGCCCG ATAACGTGGT CGGAGTGATC
AGTTGGTCGA ACCTGCAACA GGAAATTCGC TTAGGCCAAG CCTAG
 
Protein sequence
MQLTINKVAI QHAIVTAKKY LTNELRDHLS QARISAQLCI LALLFAIFAS CVILLFRLLL 
VWANHYTQIQ ALDFTGNVAD WRALLPLLGA ILIWIVAKLG SKRYKRMGIA YVLHRVKLHY
GKIPLQSAVG QFFQALFALG TNFSVGREGP AIHLGAVSAS FLAEKFNLPD NSVRIMCASG
IAAGIAATFN APLAAVIFVL EVIVREYKVH YFFPIMLSAI CGAVSSQLVF GNVHEFDRIQ
VIHIPLDHYP ILAIGGVVLG CAAALFNYSL LKVTATGQNW PLIYRLLLAG SVTTLIGLVL
PQALGTGDLA ISEAISQHPS LLLLIALLFA KIIATIAAIG LGIPGGLIGP LYGIGALLGA
ILALISAILF PSIAPYVGLY TVIGMTAMMG VCLSAPLAAL VALLEMTNDA SIILPAMFVT
IPAFLIAYQG FKTNSIFFKQ LEIMGLGYKV APVNLALQKK GVRALMDKRF VIVNNNDELL
LEVLKRAEGR PVLVRNADGV IEMLSLEMQS YDDSTTLSRH PMQGLSDSTT LNETYLLLSP
KRSGEVFIYQ DTPDNVVGVI SWSNLQQEIR LGQA