| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_0604 |
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| Symbol | |
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| ID | 5752321 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | + |
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| Start bp | 719407 |
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| End bp | 722271 |
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| Gene Length | 2865 bp |
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| Protein Length | 954 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641286866 |
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| Product | YD repeat-containing protein |
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| Protein accession | YP_001553042 |
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| Protein GI | 160873726 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3209] Rhs family protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.244718 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACAT CGTTGTTCAG CAAAACCCCG ACGGTCAAGG TCCTTGATAA CCGCGGCCTG
ATCGTGCGCG ATATCGCGTA TCATCGCCAT CCCGGCTCCC CGGACGTTAC CAGTGAGCGC
ATTACACGCC ATCAGTACGA TGCCCGTGGC TTTCTGACGC AGAGTGCTGA CCCGCGCCTG
CACGATGCCG GACTGGTGAA TTTCACGTAT CTTACGGGCC TGGCCGGCAA CGTTCTGTGC
TCGCAGGGTG TGGATAACGG CATCACTGTG GTGCTGAACG ACGCTGCAGG TCGACCTTTT
ATCGCAGTCA GCAATATCAG CACTGCCAGT GATGGCACGG AGGACAGAAG TCAGGCGGTA
ACCCGCACCT GGCAGTATGA GGATGTAGAA CTGCCTGGGC GTCTGGTGAG CGTGACCGAG
CAGGCCACCG GTGAAGCCGC CCGTGTCACG GAGCGCTTCA TGTATGCTGC CAATACTGCC
GCAGAGAAGG CGCTGAACCT GGCCGGTGCG TGCGTCTGCC ATTACGACAC GGCAGGCCTG
ACCCAGACGG ACAGCGTGGC GCTGACCGGC GTGCCGCTCT CGGTTACCCG CCGCCTGCTG
AAGGATGCGG AAAATCCCGA TGTGGTGACC GACTGGCAGG GCACCGACGC TTCTGCTTGG
AACGACATGC TGGCTGGCGA AACGTACACC ACCCTGACCA CGGCTGACGC CACCGGCGCA
GTGTTGACCA CCACCGACGC AAGAGGCAAT ACGCAGCGGG TGGCGTATGA CGTGTCGGGC
CTGCTGTCGG GCAGCTGGCT GACGATGAAA GGTGGCACGG AGCAGGTTAT CGTCGCCTCC
CTAACGTACT CCGCCGCCGG GCAGAAGCTG CGCGAGGTAC ACGGCAACGG CGTGGTGACC
ACGTATGAAT ACGAGCCAGA AACGCAGCGC CTGTCCTGGA TTAAAACGGA ACGTCCGGCC
GGACATGCCT CCGGGGCGAA GGTGCTGCAG GACCTGCGCT ACGAGTACGA CCCGGTGGGT
AACGTGCTGA AAATCACCAA TGATGCTGAA GCAACCCGTT TCTGGAGCAA TCAGAAAGTG
GTGCCGGAGA ACACGTACGT CTACGACAGC CTGTACCAGC TGGTCAGCGC AACCGGGCGC
GAAATGGCAA ATGCCGGACA GCAGGACAGC AATCTCCCCG CTGCCACCGT TCCCCTCACT
ACCGACAGCT CTGTGTTTAC AAACTATACC CGCACTTACA GCTACGATAG CGCCGGCAAC
CTGACTCAAA TCCGTCACAG CGCGCCGGCG ACAAACAACA GTTACACCAC AAACATCACC
GTCTCCGATA AAAGCAACCG GGGCGTGCTG AGTACGCTGA CTGAAAACGC TTCAGACGTT
GACGCGCTGT TTACGGCGGG TGGTCAGCAG AAACAGCTGC AGCCTGGACA GAGTCTGGTC
TGGACACCGC GTAACGAGCT GCTGAAGGTG ACGCCGGTGG TGCGAGACGG CAGTACGGAT
GACCGGGAGA GCTACCGCTA CGACGGTGGC AGTCAGCGCA TCCTGAAGCT CAGCGTACAG
AAAACCGGTA ACAGCGCACA GACGCAGCGG GCGCTGTACC TGCCGGGCCT GGAGCTGAGG
AGCACAAAGT CCGGGGATAA GGAAACGGAA AGCCTGCAGG TTATCACTGT GGGTGAGGCG
GGCCGGGCGC AGGTGCGCTT GCTGCACTGG GAGAGCGGCA GACCGGCAGA AATCACCGGC
GACCTTATAC GTTACAGCTA CGATAACCTG ATAGGCAGCA GTCAGCTTGA GCTGGACGGC
GATGGCAATA TCATCAGCAT GGAGGAGTAT TATCCATACG GGGGCACCGC GGTATGGGCA
GCCCGCAGCG CGGTGGAAGC GAACTACAAA ACCGTGCGGT ACTCTGGCAA GGAGCGTGAT
GCGACGGGGT TGTATTACTA CGGATATCGG TATTACCAGC CGTGGGCGGG TCGGTGGCTC
TCCGCAGACC CGGCGGGCAC CATTGATGGA TTGAACCTGT TCAGGATGGT GCGGAATAAT
CCAATTACAT TGCGAGATGA TGACGGGTTA GAACCGAAAA AGGCAGAGGA TGGATATTAT
TACCATTTGA CTAATGCCAG AAATTTAATG AGTATTGTAG AGAAGGGGTT TATTCCACAA
GGCTCTCAGG GACCTACGCT CTCAGCGGGG GATCTAGAGA ACAGGAAAAA AGGGGTTATT
AGATATATTT ATACTAAGGT GGCCACTGAA CTTAACCGGG GGGAGATTAG CAAAAATAAA
ATTAGCAGCA ATAATTTTAA GATGCCCTCT GATTTTTGGT CTGAGTTTAA GTTAGAAGGT
TCCAGCATTA CTAATGACAA TGATATAGAA AGTGTAAATA AGAAACTAAA TGATTCTATT
GTGCGTGGCA TTTCTGCTGT TCTTGATAAG GGCGAATTTA AAAAAAAGCA TAATGAAAAA
AAATCGGAAG ATATTACAAG ATCAAGAATG AGAGTTATGG ATGATGATGA AATAAATAAA
ATTATCACAC AAAAACCACT CCTGGAACAG CAGCGAGAGG CCGCAAATAC AAAGGGATAT
ATTTACCTTG CCGCCACAAG GAATACACTT GAAAAATATG CAATTAATTA CAAGTCATCC
AATGATGACA TGATATTACT GGCAATTCCT GATAGTATAT TTTCTGCGAA GATCTTAGAA
GAAGACGAAC AGGAACCAGA CTGCGCAGTG AGGTACAGCG GGGGGGTATT ATCAGCTGAT
CTGCGCTTTG TAAATCGGGA GGGACAAGTT GTACCTTTTG AGTATTCAGC TAGCGGTGAA
ATAATACTAG ATTATCCATC CGTTATAAAC TTCATCCGAA AGTAA
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| Protein sequence | MSTSLFSKTP TVKVLDNRGL IVRDIAYHRH PGSPDVTSER ITRHQYDARG FLTQSADPRL
HDAGLVNFTY LTGLAGNVLC SQGVDNGITV VLNDAAGRPF IAVSNISTAS DGTEDRSQAV
TRTWQYEDVE LPGRLVSVTE QATGEAARVT ERFMYAANTA AEKALNLAGA CVCHYDTAGL
TQTDSVALTG VPLSVTRRLL KDAENPDVVT DWQGTDASAW NDMLAGETYT TLTTADATGA
VLTTTDARGN TQRVAYDVSG LLSGSWLTMK GGTEQVIVAS LTYSAAGQKL REVHGNGVVT
TYEYEPETQR LSWIKTERPA GHASGAKVLQ DLRYEYDPVG NVLKITNDAE ATRFWSNQKV
VPENTYVYDS LYQLVSATGR EMANAGQQDS NLPAATVPLT TDSSVFTNYT RTYSYDSAGN
LTQIRHSAPA TNNSYTTNIT VSDKSNRGVL STLTENASDV DALFTAGGQQ KQLQPGQSLV
WTPRNELLKV TPVVRDGSTD DRESYRYDGG SQRILKLSVQ KTGNSAQTQR ALYLPGLELR
STKSGDKETE SLQVITVGEA GRAQVRLLHW ESGRPAEITG DLIRYSYDNL IGSSQLELDG
DGNIISMEEY YPYGGTAVWA ARSAVEANYK TVRYSGKERD ATGLYYYGYR YYQPWAGRWL
SADPAGTIDG LNLFRMVRNN PITLRDDDGL EPKKAEDGYY YHLTNARNLM SIVEKGFIPQ
GSQGPTLSAG DLENRKKGVI RYIYTKVATE LNRGEISKNK ISSNNFKMPS DFWSEFKLEG
SSITNDNDIE SVNKKLNDSI VRGISAVLDK GEFKKKHNEK KSEDITRSRM RVMDDDEINK
IITQKPLLEQ QREAANTKGY IYLAATRNTL EKYAINYKSS NDDMILLAIP DSIFSAKILE
EDEQEPDCAV RYSGGVLSAD LRFVNREGQV VPFEYSASGE IILDYPSVIN FIRK
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