| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_0554 |
|---|
| Symbol | |
|---|
| ID | 5752271 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | + |
|---|
| Start bp | 641243 |
|---|
| End bp | 641905 |
|---|
| Gene Length | 663 bp |
|---|
| Protein Length | 220 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641286816 |
|---|
| Product | pentapeptide repeat-containing protein |
|---|
| Protein accession | YP_001552992 |
|---|
| Protein GI | 160873676 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1357] Uncharacterized low-complexity proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGTCAC AGAAAGAAGT GCCAGTGCTT AAACAATCAG TGCTTGCGCC ATCGCAACTG
GCGCAAAGCG CGGTTTTGCA GGGCAATAGT TTTTTATCAA AACAGTTTAA TGGCTTGTCG
GAATTAGCCC AAGAGCTACA GGGCATCGAG TTCGAGGATT GCTGCTTTCA AGACTGTCAT
TTTAGCGAGA GCGTTTTTCG TAAATGTAAG TTTATCGATT GTCGCTTTGT ACGCTGCAAC
TTGAGCTTAG TGAAAGTGCC CCAGTGCCAG TTCAGCGGGG TCGAGTTTGA AGAGTGTAAG
TTAGTCGGTA TCGATTGGAC CCGCGCCGCA TGGTCGCGTT TATCCTTTGC CGCGCCCTTT
TCCTTTAAGC AATGCATTCT AAACGACTGC TCATTTTTAG GCTTGTCCCT CGATGAAATC
ATCATCGAAG AGTGTAAGGC CCACGATGTG GATTTTCGCG AGGGCAGCTT TAATCAAGCT
AATTTCACCT ACACGGATTT TAGTCATAGT CTGTTTGGTC GTAGTCATCT ATTGGAGGCG
GATTTTAGCG AGGCCTCCAA TTACGATATC GACATTTTTA ACAATAAAAT CAAAGGGGCT
AAGTTTAGCC GCGATGAAGC GATTCGCCTG CTCAACTGCC TTGATATAGA GTTAATGGAT
TAA
|
|---|
| Protein sequence | MSSQKEVPVL KQSVLAPSQL AQSAVLQGNS FLSKQFNGLS ELAQELQGIE FEDCCFQDCH
FSESVFRKCK FIDCRFVRCN LSLVKVPQCQ FSGVEFEECK LVGIDWTRAA WSRLSFAAPF
SFKQCILNDC SFLGLSLDEI IIEECKAHDV DFREGSFNQA NFTYTDFSHS LFGRSHLLEA
DFSEASNYDI DIFNNKIKGA KFSRDEAIRL LNCLDIELMD
|
|---|
| |