Gene P9211_17401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9211_17401 
SymbolruvB 
ID5730654 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9211 
KingdomBacteria 
Replicon accessionNC_009976 
Strand
Start bp1567289 
End bp1568335 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content38% 
IMG OID641286125 
ProductHolliday junction DNA helicase RuvB 
Protein accessionYP_001551625 
Protein GI159904281 
COG category[L] Replication, recombination and repair 
COG ID[COG2255] Holliday junction resolvasome, helicase subunit 
TIGRFAM ID[TIGR00635] Holliday junction DNA helicase, RuvB subunit 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTATTG TTTCTTCTAG TATCAATCAA TCTGACTCCT TAGATTCTAG GGGCAAATCA 
AGGTTGGTCG ATCCAAAATT TCTCAAGGAA GATTGTAAAC CAATTAAAGA AGATTCTTTA
AGGCCTAAAA CTTTAAATGA ATTCGTCGGT CAATCAGAGC TGAAGGAAGT CTTAGCTATC
TCAGTCAAGG CAGCTTTGTA TAGAAAAGAG GCTTTAGACC ATGTTTTGCT CTACGGCCCA
CCGGGCTTAG GTAAAACCAC AATGGCCTTA GTTTTAGCCC AAGAGCTTGG TGTGAAATGC
AGAATTACTA GTGCACCTGC ACTTGAAAGG CCTAGAGATA TCGTTGGTTT GCTAATGGAT
TTGCGCTCAA AAGAATTGTT GTTTGTGGAT GAAATCCATC GACTAACAAA TTCTGCAGAA
GAGCTTTTAT ATCCAGCATT AGAAGATTTT AGACTTGACT TAACAATAGG CAAAGGAACA
ACTTCTAAAA CCAGAGCAAT AGAGCTACCA AGGTTTACTT TGGTTGGTGC TACAACTAGG
CCTGCTGCAA TTAGTTCACC TTTAAGGGAT CGCTTTGGAA TTACTCAAAG ATTTGGCTTT
TATAATTTGA AAGATTTGCA GGAGATAGTA AAGAGATCTG CTCGCTTTCT TGAACTATCT
ATGATTGATG ATGCAAGTTT AGAAATCGCA CGACGTTGTA GAGGTACACC AAGAATTGCC
AATCGGTTAC TTCGTAGAGT TAGAGATTTT GCAACTGTTA AGTGTAATAA GAAATTGATT
GATATTGATT TGGTAGATGA ATCATTAAAA TTACATTGTG TAGATGAGCG TGGTTTAGAT
CAATTTGATA GAAGACTTTT ATCGTTATTA GCATCACATG GAGGAGGACC TGTAGGCTTA
GATACTCTTG CTGCTGCATT AGGCGAAGAG CCTGCGACAC TCGAATCAGT TGTAGAACCT
TTTCTTCTTC AAATAGGTTT TTTACAAAGA ACACCAAGAG GCAGGATTCT TACACTTCAA
GGACAAGAAC ATATTGAATG TCATTAG
 
Protein sequence
MAIVSSSINQ SDSLDSRGKS RLVDPKFLKE DCKPIKEDSL RPKTLNEFVG QSELKEVLAI 
SVKAALYRKE ALDHVLLYGP PGLGKTTMAL VLAQELGVKC RITSAPALER PRDIVGLLMD
LRSKELLFVD EIHRLTNSAE ELLYPALEDF RLDLTIGKGT TSKTRAIELP RFTLVGATTR
PAAISSPLRD RFGITQRFGF YNLKDLQEIV KRSARFLELS MIDDASLEIA RRCRGTPRIA
NRLLRRVRDF ATVKCNKKLI DIDLVDESLK LHCVDERGLD QFDRRLLSLL ASHGGGPVGL
DTLAAALGEE PATLESVVEP FLLQIGFLQR TPRGRILTLQ GQEHIECH