Gene P9211_11171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9211_11171 
Symbol 
ID5731103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9211 
KingdomBacteria 
Replicon accessionNC_009976 
Strand
Start bp1020810 
End bp1022270 
Gene Length1461 bp 
Protein Length486 aa 
Translation table11 
GC content39% 
IMG OID641285485 
Productexodeoxyribonuclease V 
Protein accessionYP_001551002 
Protein GI159903658 
COG category[L] Replication, recombination and repair 
COG ID[COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0885219 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.565866 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAAAATC TTTCGTTAAC ATTTGACCAA GGCAAAGCAA TCAAAGCTTT TGAACTTTGG 
CTTGAGAAGA CTTCGCTTAC AGACCCTTTT ATTCTTAAGG GGTGTGCAGG AACAGGAAAA
ACGTTTTTAT CAATAAAGTT TCTTGAGCTT GTAGAGAATC GCAAGCTTTG TTGGACGGTT
GTTGCTCCAA CGCATAAAGC TGTTGGTGTT CTTCGAAGGT CTATGTCTAG GGCAAATCTA
AAACCAACTT TTTACCCTTC AACAATTCAT AGATTGCTTC GATTAAAGCT AAAAAGACAA
GGTGATACAG AAGCATGTGA ACAAACTCCT CAAACAATGA AATCACTTGA ACAGCTAAAG
CTAGTACTTG TTGACGAAGC CTCAATGATA AGTAGCACAC TCTTAGAGAT AATTCTTCAA
TGTGCCCATA CTTATAAAAC CAGACTTGTT TTTGTTGGAG ACCCAGCCCA GTTACCACCA
ATTGGTGAAG TTCAGAGCCC AGTCTTCTCT ATCAAAAAAG CAGCTCATAT TCAACTAAAT
GAAGTTGTGC GTCATCAGGG GCCCGTTTTG AAGTTGGCTA CTTTGCTTAG GGATGAAAGT
TTTCTTTGCC CATCGCCGCC TTGTTTCCCT GTTGTAGCTA ATACACAATG CTGTATTGGG
TCGCTTGACC ATAAAGAGTG GTTGGAAAAA GCTAAGGATT CTTTGTACTC AGCCTCCAAG
AAAGATGATC CGGATGCGGC GAGAATTCTT TGCTATACCA ATAGATTTTT AGAAAGGTTG
ATACCCCATG CTCGTCGAGC TATTCATGGA GCTATTGCTG ATGAAATGTC TGTTTTACCA
GGAGAAGTAC TGATTAGTCG CAGAGCAGTC ATGAGTAATG CATCGCTTGA GCAATTTAGT
ACTGAAGAAG AGCCTGGAAT GCTTTTTGGT TCTAATACAG AAATGATAGT AAAGGAGGTA
AGTGAAGAAT TAAATGATTT TGGAAATTCT GAATTTGCTG ACCAGGGTTT AATTGACTTT
CCCCAGATGA AAATTTTAAC TGCAAAAGTT AGCTGCCGAG GTTCAGAATT TTTGGTTCGC
CTCATGCCTG AAGTTGGATC ATCTTCAAGG GCAACTTTAG ATTGCTTTTT AGAAGACTTG
GCATCAAAAG CAAGGCAAGC CAGTAGTAAA GAAGCGCGTA AGCTTTGGAA GATGTTCTTC
TATTTTAGAG ATTCCTTTGC TTATCTTTGC CCAGCTTCAG TTTTGACAGT TCATAGAAGT
CAAGGGAGCA CTTTTGGTGA GGTATTCGTT GCTTCAGATG TCTTTTGGCC TAATGATATT
TCTTTAAGGA GACAGCTTGC TTATGTGGCT GTTAGTAGAG CAAATAAAGG CGTCTGGCTA
TTAGGAAGTA ATGATAAACT ACATAAAAGA GACATATGGG AAAGAGAAAT AGATTTGATT
CATCAAGATA TGACTAATTA A
 
Protein sequence
MKNLSLTFDQ GKAIKAFELW LEKTSLTDPF ILKGCAGTGK TFLSIKFLEL VENRKLCWTV 
VAPTHKAVGV LRRSMSRANL KPTFYPSTIH RLLRLKLKRQ GDTEACEQTP QTMKSLEQLK
LVLVDEASMI SSTLLEIILQ CAHTYKTRLV FVGDPAQLPP IGEVQSPVFS IKKAAHIQLN
EVVRHQGPVL KLATLLRDES FLCPSPPCFP VVANTQCCIG SLDHKEWLEK AKDSLYSASK
KDDPDAARIL CYTNRFLERL IPHARRAIHG AIADEMSVLP GEVLISRRAV MSNASLEQFS
TEEEPGMLFG SNTEMIVKEV SEELNDFGNS EFADQGLIDF PQMKILTAKV SCRGSEFLVR
LMPEVGSSSR ATLDCFLEDL ASKARQASSK EARKLWKMFF YFRDSFAYLC PASVLTVHRS
QGSTFGEVFV ASDVFWPNDI SLRRQLAYVA VSRANKGVWL LGSNDKLHKR DIWEREIDLI
HQDMTN