| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9211_10211 |
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| Symbol | lspA |
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| ID | 5731874 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9211 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009976 |
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| Strand | + |
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| Start bp | 913045 |
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| End bp | 913521 |
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| Gene Length | 477 bp |
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| Protein Length | 158 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 641285388 |
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| Product | putative lipoprotein signal peptidase |
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| Protein accession | YP_001550906 |
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| Protein GI | 159903562 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0597] Lipoprotein signal peptidase |
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| TIGRFAM ID | [TIGR00077] lipoprotein signal peptidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.148717 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.209845 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAAGGT CATTAAATAG AAGAAAATAT ACTATTATTA TAGTAAGCCT AATAATTATT
TTTATAGATC AGATATCTAA GTATATAGTG CTAGATTTTA TGCAAAAGAG TGATCCTATA
GTTTTAATTC CGGGGTTTTT ACAACTAAAT CTCATAAGAA ACTATGGAGC AGCATTCAGT
CTATTTAACA ACCAATCAAC ATTCCTAGCA TTTGTAAGCC TTATAGTCTC TCTATTAATA
ATTAGTTATG TAATTATTAA ACCGACTATT AAAAGATTTC AAGGGATAGG TTTAGCATTC
CTTTTAGGAG GAACATTAGG CAATGGCTTA GACAGATGGA TACTAGGTTA TGTAAATGAC
TTTCTTGAAT TATTATTCAT CCAATTTCCA GTTTTCAACT TTGCAGACAT CTCAATTAAT
ATAGGAGTAA TCTGTATAAT CCTTAGCAAT CATTCCAAGC CTAAGTTTCA TCCCTAA
|
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| Protein sequence | MKRSLNRRKY TIIIVSLIII FIDQISKYIV LDFMQKSDPI VLIPGFLQLN LIRNYGAAFS
LFNNQSTFLA FVSLIVSLLI ISYVIIKPTI KRFQGIGLAF LLGGTLGNGL DRWILGYVND
FLELLFIQFP VFNFADISIN IGVICIILSN HSKPKFHP
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