| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9211_07731 |
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| Symbol | prfC |
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| ID | 5730743 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9211 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009976 |
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| Strand | + |
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| Start bp | 678918 |
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| End bp | 680585 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 641285137 |
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| Product | peptide chain release factor 3 |
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| Protein accession | YP_001550658 |
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| Protein GI | 159903314 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG4108] Peptide chain release factor RF-3 |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00503] peptide chain release factor 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00107568 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACTCCT TTTCCTCTAC CAACGATCCC TCGAAATCAA ATTCAGAAGA CATATCTGGG
ATAGACCTGC TTAATGCAGT TGATAAAAGG AGAAACTTTG CAATTATTTC TCATCCAGAT
GCCGGCAAGA CAACTCTTAC TGAAAAATTA CTGCTATATG GTGGGGCTAT TCAGCAAGCT
GGTGCAGTAA AAGCTAGAGG CGAACAAAGA AAAGTTACTT CGGATTGGAT GGAACTTGAA
AAGCAAAGAG GGATATCTAT TACTTCAACA GTTTTGCAAT TTGCGTACAA GGGGATAACT
ATTAATTTAT TAGATACTCC TGGCCACCAA GACTTCTCTG AAGACACTTA TCGAACTCTG
GCTGCTGCAG ACAATGCAGT AATGCTTGAA GATGCTGCGA AAGGTCTGGA GCCGCAAACA
AGGAAGTTGT TTGAAGTGTG CAGGCTTAGG AAAATACCTA TTTTTACTTT TATAAATAAA
ATGGATAGGC CCGGACAAGA GCCTCTTTCA TTATTGGATG AGATTGAGGC TGAATTAGGG
CTTTCAACCT GGGCAGTTAA TTGGCCTATT GGCAGTGGGG ATCTTTTTCG AGGTCTTATT
GATCGAAGCA CTAGAGATGT CTTGATCTAT ACAAAAACAG AACGAGGCAA GCAGTCTATT
GAGCAGCGTT ATAAATTTGA TGCTCCTGAG GTTAAAGAGT TAGTTGAAGA TGATCTTTTA
CAAAAGGCTT TAGAAGAGAT CAATTTATTA GATGAGGTTT CTGCACAAAG GGATATAGGG
CTAATTCATG CAGGCGAATT AACACCTGTT TTTTTTGGCT CTGCAATGAC AAATTTTGGT
GTAAAGCCAT TCCTTGATAC TTTCTTAGAA CTTGCACAAG GACCAGTTGC AAGAAATAGT
GCTAGTGGTC CTATTGATCC CACAACAGAT TCTTTTAGTG GATTTGTTTT TAAACTTCAG
GCAAATATGG ACCCTCGTCA TAGAGATAGG ATTGCTTTTG TTCGAGTTTG TAGTGGCCGT
TTTAAAAAAG ATATGACTGT TCGTCATGCT AGAACTGGAA AAAATATTCG ATTATCTAGA
CCACAAAAAA TCTTTGCGAA AGATCGTGCA GTAGTAGAGG ATGCTTATCC AGGGGATGTT
ATTGGATTGA ACAATCCAGG GATGTTCTCA ATTGGAGATA CTCTTTATAC AGGCCAACAT
ATTGAATATG AAGGGATCCC ATGCTTTAGT CCTGAAATAT TCAGTTGGTT ACGTAATCCC
AATCCCTCCT CATTTAAAAA TTTTAGGAAA GGAGTAAATG AGCTAAGAGA GGAGGGTGCT
GTACAAATAC TTTATGACAA TGATCAAAGT AAAAGAGACC CTATCCTGGC AGCGGTAGGA
CAACTTCAAT TAGAAGTTGT TCAACATAGG CTGGAAAATG AATATGGCGT AGAGACAATA
TTAGAGCCAC TGGGTTATCA AGTCGCAAGG TGGGTAGATG GAGGTTGGCC TGTACTTGAG
GAGATAGGAA GAATTTTTAA TTGCAAAACG GTACAGGACT CATGGCATAG ACCAGTTCTG
CTTTTTAAAA ATGAATGGAA TTTAAACCAA CTAACCGAGG ATCATCCAAA TTTAATTTTG
AGTACTGTCG CACCCGTTGT AAGTGGAGTA GATCCTATAA GTCTTTAG
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| Protein sequence | MNSFSSTNDP SKSNSEDISG IDLLNAVDKR RNFAIISHPD AGKTTLTEKL LLYGGAIQQA
GAVKARGEQR KVTSDWMELE KQRGISITST VLQFAYKGIT INLLDTPGHQ DFSEDTYRTL
AAADNAVMLE DAAKGLEPQT RKLFEVCRLR KIPIFTFINK MDRPGQEPLS LLDEIEAELG
LSTWAVNWPI GSGDLFRGLI DRSTRDVLIY TKTERGKQSI EQRYKFDAPE VKELVEDDLL
QKALEEINLL DEVSAQRDIG LIHAGELTPV FFGSAMTNFG VKPFLDTFLE LAQGPVARNS
ASGPIDPTTD SFSGFVFKLQ ANMDPRHRDR IAFVRVCSGR FKKDMTVRHA RTGKNIRLSR
PQKIFAKDRA VVEDAYPGDV IGLNNPGMFS IGDTLYTGQH IEYEGIPCFS PEIFSWLRNP
NPSSFKNFRK GVNELREEGA VQILYDNDQS KRDPILAAVG QLQLEVVQHR LENEYGVETI
LEPLGYQVAR WVDGGWPVLE EIGRIFNCKT VQDSWHRPVL LFKNEWNLNQ LTEDHPNLIL
STVAPVVSGV DPISL
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