Gene P9211_07421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9211_07421 
Symbol 
ID5731487 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9211 
KingdomBacteria 
Replicon accessionNC_009976 
Strand
Start bp646265 
End bp647272 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content34% 
IMG OID641285105 
Productputative light-dependent protochlorophyllide oxido-reductase 
Protein accessionYP_001550627 
Protein GI159903283 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.784304 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.258775 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAAA CAATTCTTAT AACAGGAGGG ACTTCTGGAA TTGGTTTTCA GGCTGCAAAG 
TTGTTGCTAA AAGCTGGTTG CAGACTTATC ATTATTTGCC GTAATCAAGA GAGGTCTAAG
GAGTTACTCT TAAGATTTAA AAATGATAAC TCTATAGGAA AAGAATCAAT TTTGAAAAAT
CTTGATTTGA GAATAGCTGA TTTGGCTGAT CTTAATAGTC TTGAAAAATT GACTAATAAG
TTGATCAGAG AAGATATTTT GATAGATATA ATTATACTGA ATGCAGGGTT GCAATATACT
GGCTCTAAGG ATATTAGGCT GTCTAAGCAG AGTATCGAAC TTACTTTCGC AGTTAACCAT
TTAAGTCACC AATATTTAAT TCAGAGGCTA ATGAAATTAG TCATTAAGTC AGAATTTCCC
AGAATAATTG TTACGGCTTC GGAAGTTCAT AATCCTTTGT TGGCTGGAGG AAAAGTAGGT
AGACCTGCTG GGCTTGGGAA TTTACTTGGC CTTAGCTCTT TAAAAAAAGT TTGTATGATT
GATGGAACTT CAATCTTTAA TGCTGATAAG GCTTACAAAG ATAGTAAGCT ATGTAATGTT
ATTTTCTCGA GAGAATTATA TAGAAGATTG AAACTGAGAG GTTTAAATAT ACCTATTATT
TGTTGGGCTC CAGGACTTGT TATTCCAAGG AGTAAAGGTG GCTTTTTTCG CTATAGTAGG
AAATACAATG AACTTGGTCA GATAGTCTTT TCTTTTATAG CAAGAGATTT GTTGCGGATA
ACTGAATCGG TTGAAAAAGC AGGTCAGATT CTTTTTAATC TTGCAATAAA CTCTGAATAT
GCTAACCCAG GCTTTTCTTA CTACAGTAAT AGGCTAAAAC TTTTTGCAAG CTCCTCATTG
GAAGAAAGTG AGATTAGTGA AGAGGCTAAA GATGATAAAA AAGCATTTGA ATTATGGAAC
TTAAGCAATC AACTATTAAT CAAATATTGC ACTCTTGAGA CTATGTAG
 
Protein sequence
MNKTILITGG TSGIGFQAAK LLLKAGCRLI IICRNQERSK ELLLRFKNDN SIGKESILKN 
LDLRIADLAD LNSLEKLTNK LIREDILIDI IILNAGLQYT GSKDIRLSKQ SIELTFAVNH
LSHQYLIQRL MKLVIKSEFP RIIVTASEVH NPLLAGGKVG RPAGLGNLLG LSSLKKVCMI
DGTSIFNADK AYKDSKLCNV IFSRELYRRL KLRGLNIPII CWAPGLVIPR SKGGFFRYSR
KYNELGQIVF SFIARDLLRI TESVEKAGQI LFNLAINSEY ANPGFSYYSN RLKLFASSSL
EESEISEEAK DDKKAFELWN LSNQLLIKYC TLETM