Gene P9211_04971 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9211_04971 
SymbolpriA 
ID5730353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9211 
KingdomBacteria 
Replicon accessionNC_009976 
Strand
Start bp466507 
End bp468768 
Gene Length2262 bp 
Protein Length753 aa 
Translation table11 
GC content44% 
IMG OID641284856 
Productprimosomal protein N' (replication factor Y) 
Protein accessionYP_001550382 
Protein GI159903038 
COG category[L] Replication, recombination and repair 
COG ID[COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase 
TIGRFAM ID[TIGR00595] primosomal protein N' 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACTTT TGGAGATAGA TGTATGGCTT GAAGTGGGGA GGGAGGGGCG TACTTTTTCT 
TATGGAGATA GTAAGCAATT AGGCATTGAT TTAGGGGACA TTGTTCTGGT TGGCTTGAGG
GGTAGGCGTA TGCATGGTCT TGTTGTAGGG AAAAGAGTTC GGCAATTGAA CTCAGAAGCA
GAGCAACTAA GTCTTAAAAA AAAGAACTTT TCTCTGACTG ATATTGAATC AATTGTTCAG
AAAGCAGCAG TTGAACCAGA GTGGCGTGAG TGGGTGGAAG CATCAGCGAA TAAATGTCAT
ACAGGTTTAT TCAGGATGCT AAAAGCTGCT CTCCCTCCAG GTTGGCTGGG TTCTAGAAAT
CTCAAGAGTT CTGAACAGAA AAAATATTGG TGGATTTCTT TGATAACTCC TCATGACATC
GACACAGAAC TTTCTTTCAA ACAGCAAAAA GTTGTCAATT TTCTTCAATC CCGAGGAGGA
GGATCATGGC AGAAGGATTT TGTAATCGAA GGGATCTCAT TAAGTGTGTT AAAGAGCTGC
TTGGCGAGAG GTGTTGTTTC CCGTGAAAAA CGAAACTTCC TTATTAGTAG ACAAAGTACG
GCTATAAAAC CTTTCCTCGA CAAAGCAAAT CAAGAAAGTC CTCGACACTT GACTGACGAA
CAGAAAATAG CGATGGAGGC TTTCTTTGAG CAGCCACCAG GATCAACCTT TTTGTTATGG
GGTGTAACTG GTTCTGGGAA AACAGAGGTT TATCTTCAAA TAGTGGCAAA GGAGTTGTCT
GAAGGTAGGC ATTGTCTAAT ACTTGCGCCT GAAATTGGAT TGATTCCTCA ACTTGTAGAT
CGCTTGGTGA AGCGTTTTGG TCCTCGCGTT TTGGAGTATC ACAGTGGCTG TACACAAAAT
GAACGAGTTA AGGCTTGGAG GGAAGCATTA ACTACCTCTC AAGCACTTGT TGTTGTTGGA
ACTCGCTCGG CTGTTTTCCT TCCTTTGACA CCTTTGGGTC TTATTGTTCT TGATGAGGAA
CACGATAGTT CTTATAAACA AGAATCTCCT ATGCCTTGTT ATCACGCCAG AGATTTGGCT
GTAGATCGTG CTCAAAGAGT TGGAGCAAAG GTTTTGTTAG GCAGTGCCAC ACCATCACTT
GCTACGTGGA AGGATTTGTC TCCTAGAGGC CCTATTTCTT TCAAGCGCTT GACTCGTCGC
ATAGCTAATA AGCCGTTGCC TCTTGTACAT GTTGTTGATA TGAGGCAGGA GCTGGCCTAT
GGCAATAGAC GATTAATTAG CAAACCACTA ATGGATCGAC TTTCAGCACT GCCAGCCTTA
GGCGAACAGG CAGTTATTTT GGTCCCTAGG CGTGGTTACA GTACTTTTTT GAGTTGTCGA
AGTTGTGGGG AGGTTGTTCA ATGTCCAAAC TGTGATGTCT CATTAACTGT TCATCAAGGA
CGTCAAGGAT CTCAATGGTT GAGATGTCAT TGGTGTGATC ATCGAGCCAA TATTGGCTTT
AACTGCAATC AATGTGGCTC AAAGGCTTTC AAGCCTTTTG GAGCAGGTAC GCAACGAGTC
TTAGAGCATC TTGCTACGGA GTTAAAGGAA TTAAAATTAT TACGTTTCGA CCGGGACTCT
ACTGGTGGTC GAGATGGTCA TCGTCGCTTG TTAGAAAAAT TTGCTGCTGG TAAAGCAGAC
GTCCTTGTAG GTACGCAAAT GCTAGCCAAG GGCATGGATA TACCTAGTGT CACTTTAGCG
GTGGTGCTTG CTGCTGACGG TTTATTGCAT CGACCAGATT TGTTTGCAGG AGAACAGTCC
TTGCAGCTTT TTATGCAGTT AGCTGGTAGA GCTGGACGGG GTGAAAAGAA AGGAAAAGTT
TTTGTCCAGA CCTATTCTCC AGAGCATCCA GTAATTAAAC ATTTGGTTGA TGGGTGTTAT
GAGAGTTTTC TTAAGAAGGA GGCAAAATTA CGCAGTGAAG CTGGGTTGGT CCCATATAGT
CGCGCTTGCT TACTTCGTGT CTCAGGAGAA ACTGCTTCAG TTACAGCTAC TTCCGCTACT
GCATTAGCAG AATATCTAAA ACCCTTTTGC AAATCTAATG GGTGGACCAT AGTGGGCCCA
GCTCCAGCAA TGGTTGAAAG GGTTGCAGGA AAAAGTCGTT GGCAACTTTT ATTACATGGT
CCACAGTCAA GTCCTTTACC CATCCCTTCG GGAGGACAAT TGTGGTCATG TCTATCAAAA
GGTGTCAATT TATCTATAGA CCCAGATCCA ATTAATCTTT AA
 
Protein sequence
MRLLEIDVWL EVGREGRTFS YGDSKQLGID LGDIVLVGLR GRRMHGLVVG KRVRQLNSEA 
EQLSLKKKNF SLTDIESIVQ KAAVEPEWRE WVEASANKCH TGLFRMLKAA LPPGWLGSRN
LKSSEQKKYW WISLITPHDI DTELSFKQQK VVNFLQSRGG GSWQKDFVIE GISLSVLKSC
LARGVVSREK RNFLISRQST AIKPFLDKAN QESPRHLTDE QKIAMEAFFE QPPGSTFLLW
GVTGSGKTEV YLQIVAKELS EGRHCLILAP EIGLIPQLVD RLVKRFGPRV LEYHSGCTQN
ERVKAWREAL TTSQALVVVG TRSAVFLPLT PLGLIVLDEE HDSSYKQESP MPCYHARDLA
VDRAQRVGAK VLLGSATPSL ATWKDLSPRG PISFKRLTRR IANKPLPLVH VVDMRQELAY
GNRRLISKPL MDRLSALPAL GEQAVILVPR RGYSTFLSCR SCGEVVQCPN CDVSLTVHQG
RQGSQWLRCH WCDHRANIGF NCNQCGSKAF KPFGAGTQRV LEHLATELKE LKLLRFDRDS
TGGRDGHRRL LEKFAAGKAD VLVGTQMLAK GMDIPSVTLA VVLAADGLLH RPDLFAGEQS
LQLFMQLAGR AGRGEKKGKV FVQTYSPEHP VIKHLVDGCY ESFLKKEAKL RSEAGLVPYS
RACLLRVSGE TASVTATSAT ALAEYLKPFC KSNGWTIVGP APAMVERVAG KSRWQLLLHG
PQSSPLPIPS GGQLWSCLSK GVNLSIDPDP INL