Gene P9211_03811 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9211_03811 
Symbol 
ID5730834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9211 
KingdomBacteria 
Replicon accessionNC_009976 
Strand
Start bp360599 
End bp361582 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content47% 
IMG OID641284736 
Productsite-specific recombinase XerD 
Protein accessionYP_001550266 
Protein GI159902922 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACCA TTCGAAGAAG CGGCAAAGGC TGGCAAGCAC TCATTAGAAA GAAGCAATAT 
CAAGGACCAA AAGCCAAAAC ATTTAGCTCA AAAAGCCAAG CGCAGTTGTG GGCGAATGCT
GTTGAAGGGT CTCTCAAAAG GCCAACCCAA TTAGACCAGC CGCCACCGCA AATTCTCAAA
GAGGCTATTG ACCTGTATAT CGATGGGCCA CTGCAAAAAC ACCGCAGTGG TCATAACGAA
CAATATCCCT TAAGAGCAAT GGCTAATAGC TGGATGGGAG GTGTTCTGCT TAGTGAAATG
TCAATCCGGC ATTTTGCTCT TTGGAGAGAC GAACGACTGC TCAAAGTCAA ACCCAACACA
GTGATGAGAG AACTCAGGAT CTTGCGGGTT CTGCTCGATT GGGCCAAAGA TGAACAAGGA
TGCCTGCTCA AGAGCAACCC TGCACGGGAA CTCAAAGTCA GAGGGACCCA TGACGCCAGA
ATTCCTCATC TCACCAAACA ACAAGAGCAA GATTTACTCC AGCAATTAGC TCAAGCCAAA
AATCCCAATC ATCTGCGCTT AACGCAGCTG GCACTAGCAA CTGGAATGCG ACGCTCTGAA
CTACTTTCAA TGAAATGGGA TGATTTAGAC CTCGATCTAA GACTTGTTTG CCTAACAAGA
AAAGATTGCG CCGCCCAGGG AATGCAAAGG AGTGAACGCT TAGTACCACT ATCTCCACAA
GCCGTTGAGC TCCTCGCTCA ATATCCAAAA GAGCAACAAC ACATCATTGG ACTGAGCTCT
GGTTCTGCAC GTCACGGATT TGATCGAGCG AGAAAAGCTG CTGGATTGAA TCAACTCCGA
TTTCATGACC TGCGCCATAT CGCCATCAGC AAGATGTGGG CTGAAGGTAT GAATGCCCTC
CAAATATCAG CAATTAGTGG GCATAAAGAT CTACGAATGT TGATGCGCTA TAGCCATTAT
CAACTGGGGT ATGGGGGCAA ATGA
 
Protein sequence
MATIRRSGKG WQALIRKKQY QGPKAKTFSS KSQAQLWANA VEGSLKRPTQ LDQPPPQILK 
EAIDLYIDGP LQKHRSGHNE QYPLRAMANS WMGGVLLSEM SIRHFALWRD ERLLKVKPNT
VMRELRILRV LLDWAKDEQG CLLKSNPARE LKVRGTHDAR IPHLTKQQEQ DLLQQLAQAK
NPNHLRLTQL ALATGMRRSE LLSMKWDDLD LDLRLVCLTR KDCAAQGMQR SERLVPLSPQ
AVELLAQYPK EQQHIIGLSS GSARHGFDRA RKAAGLNQLR FHDLRHIAIS KMWAEGMNAL
QISAISGHKD LRMLMRYSHY QLGYGGK