Gene P9211_01101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9211_01101 
Symbol 
ID5730700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9211 
KingdomBacteria 
Replicon accessionNC_009976 
Strand
Start bp111494 
End bp113011 
Gene Length1518 bp 
Protein Length505 aa 
Translation table11 
GC content33% 
IMG OID641284453 
ProductRND family outer membrane efflux protein 
Protein accessionYP_001549995 
Protein GI159902651 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAAAC CCTCTGCAAA GTTAATCATT ACAACAATCC TTCTAAACGC AGGTTTAATC 
ACATGTGCAG GAATACAAAA TAAAGTACAA GCATTTACAG ACAAACAAAA TTGGAAGTTA
CCAAAAGACT CTCAAGAGGT ATTAATCCAA AATGAATTGG AAATAACAAA AGATAATATA
AAAAATCTCA TTGAACAGAA TAATCCAGAA ATAGAAATAA TGAAAAGCAA GATTAAGCAA
GCAAAGTTCG ATTTAAGAAG TGAGCTATCA GCTTGGTACC CAAATCTAGA CATTTCCGGA
TCAGGTTTAC CTCAATATCT AGCAGGAAGT ACAGATAAAA ATTCTTCTGC AGATACTTCT
AGCAAGCAAT GGAAAGCCAA CTTGAGTGCG ACAGTGAGAT GGTATCTAAT CAACCCTGCT
CGCATTCCTG ATATTGAGGC TGCAAAAGAT AAATTAGAAA ACGCAAAAAT TTCATATGAA
ATCAAACTAA GAGATTTATA TCTAGAAGGG CTAAAACAAT TCTTCCAGTT ACAAAAATCG
AATCAAGAGG TTCGTATCGC TAAGGATTCA ATCTTAACTT CCGAAACTTC TCTAAAAGAA
GCTGAGGTAA GATTAGATGT AGGAATTGGT ACAAAATTTG AAGTTTTAGA GGCTCAAACT
CAGCTTTCAA AAGATAAGCA ACTGCTGTCC AAGAAGTCAG GTGAGCTAAA AATAAATCAA
AGAAAGCTAG CCAACATTCT GAACCTAAAC TCAACAACCA ACCCAATCAT CACATCGAAA
ACAGCAATTA TTGGTTTGTG GGATACTTCT CTTGAAGAAA GTATTCTATC AGCATACTCA
TTTCAAAAAG AAATTGAAAA GTTAATCCTT AAAGTATCTA TAAATAATAA TCAAGCAAAC
TCAGCGCTAG CAGCAATTCA ACCAAAACTG AGTATCTTTA ACACCTATAC TACTTCTTTT
GCTAAGGGTG AGGTAGCAGT AGCTGATCCA GACACTGGAA ATGAAGTATT TAGTGAAAGT
AATACTATAG GACTTCAATT TGACTGGAAG GTTTTTGATG GTGGTTATGG TAAGTCAATT
TATAAATCTA AAAAAGAAAA AAGCAAAGAA CTCGAATTTG ATATCGAGTT AAAAAAGAAG
CAAATCCGAG AAGAAATAGA AGAGAGTTTT TTTAATCTAG AAATAGCAAA GCAAAATATT
TCTAATACTT ATAATGAAAT TATTTCTGCA AGAGAGTCTC TTCGATTAGC TTTATTACGG
TTAAAAGCAG GCATAACAAC TCAACGGGAA GTAGTGACTA ATCAAAGAGA TCTAACACAA
GCAGAAGTAA ATTATATTAT AGCTATCACA GATTATAATT CAAACTTAGT TAATCTTAGA
AGAGAGACTG GGATTGAAAG GTTGAAAGGT TGTAACAAAA GAACAGATGC AAACCCAAGA
CAAGAAAATA ACAATGTAGA TAAAAGTATA GTTATAAATA CTGAGAAGAT GGCTTCACCA
TGTATAGAAC TTCTATAA
 
Protein sequence
MRKPSAKLII TTILLNAGLI TCAGIQNKVQ AFTDKQNWKL PKDSQEVLIQ NELEITKDNI 
KNLIEQNNPE IEIMKSKIKQ AKFDLRSELS AWYPNLDISG SGLPQYLAGS TDKNSSADTS
SKQWKANLSA TVRWYLINPA RIPDIEAAKD KLENAKISYE IKLRDLYLEG LKQFFQLQKS
NQEVRIAKDS ILTSETSLKE AEVRLDVGIG TKFEVLEAQT QLSKDKQLLS KKSGELKINQ
RKLANILNLN STTNPIITSK TAIIGLWDTS LEESILSAYS FQKEIEKLIL KVSINNNQAN
SALAAIQPKL SIFNTYTTSF AKGEVAVADP DTGNEVFSES NTIGLQFDWK VFDGGYGKSI
YKSKKEKSKE LEFDIELKKK QIREEIEESF FNLEIAKQNI SNTYNEIISA RESLRLALLR
LKAGITTQRE VVTNQRDLTQ AEVNYIIAIT DYNSNLVNLR RETGIERLKG CNKRTDANPR
QENNNVDKSI VINTEKMASP CIELL