Gene MmarC6_1760 details

Gene Information

• Locus tag: MmarC6_1760
• ID: 5737348
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanococcus maripaludis C6
• Kingdom: Archaea
• Replicon accession: NC_009975
• Strand: -
• Start bp: 1649482
• End bp: 1650075
• Gene Length: 594 bp
• Protein Length: 197 aa
• Translation table: 11
• GC content: 30%
• IMG OID: 641284260
• Product: TPR repeat-containing protein
• Protein accession: YP_001549803
• Protein GI: 159906141

Plasmid Coverage information

• Num covering plasmid clones: 42
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGAACA ATTACGGTAT TCAAAAATGG CACAGCCACG GAGCACTGCT TTGTAATTCT 
GAAAAATATT CAGAAGCACT CGAGTGTTAT GATAAAATAC TTTCATATTA TCCAAAAGAT 
TTTTTAGCAG TCTTTGGAAA GGGAATGGTT TTTTTAAAAC TTAAAGAATA CGAAAAAGCG 
CTTCAATGTT TTAACAGCGT TTTAAACATG AATTCATCAT ATATTCCAGC AATAAAAAAT 
AAACAGATGA TAGAAGAAAA GTTAAAAAAG CAGGACAGCG AAAATTATAG TAAATTTTCA 
AAAATGGGTG TTGAAAGCTA TAACTTGGGA AATTTTGAGA ACGCCCTTAA CTATTTTGAA 
AAAGCTTTTG AAATAAATCC ATATTCAGAA ACTTTGAGAA AAAATATTGA AAAGACACGC 
CTTAAATTAA AAGAAACGCT TCCGATAAGG TGGAATAACA AAGGTGTCGA ATACTACAAG 
GTTAAAAACT ACCAAAAAGC ATTCGAATGC TTTGAAAAAG CTGTTAAGTT AAACCCAAAA 
TTTGAATCTG CAATAAAAAA TAAAGCAATG GTTCAAAAAT TACTTAAGAA TTGA 

 

Protein sequence

MKNNYGIQKW HSHGALLCNS EKYSEALECY DKILSYYPKD FLAVFGKGMV FLKLKEYEKA 
LQCFNSVLNM NSSYIPAIKN KQMIEEKLKK QDSENYSKFS KMGVESYNLG NFENALNYFE 
KAFEINPYSE TLRKNIEKTR LKLKETLPIR WNNKGVEYYK VKNYQKAFEC FEKAVKLNPK 
FESAIKNKAM VQKLLKN