| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_1502 |
|---|
| Symbol | |
|---|
| ID | 5737381 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C6 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009975 |
|---|
| Strand | - |
|---|
| Start bp | 1407014 |
|---|
| End bp | 1408240 |
|---|
| Gene Length | 1227 bp |
|---|
| Protein Length | 408 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 641284003 |
|---|
| Product | SufBD protein |
|---|
| Protein accession | YP_001549547 |
|---|
| Protein GI | 159905885 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.0133685 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGTCAG AAAAAAAGTT GCAACAAGTA AGGGAAATGG CTGAGAAATA CAAAGACGTT
CCTGCACCAT TTGGGGAAGA TATTGATTTA AGCATGTACC CTACACCAAA AGAAAATCTT
TTGAAAGTAG ATTCATTAAA TGAGTTAAGT GACGACCACA AAAAAGCTCT CGCAAATGTT
GGTGTAGATA TTGAAGAAAA AAACACTATT GGTTCCTACG TTCAGGTAAA TAGTGATGCA
ATATACACCA AAATGTATTC CGATATTATA ATTATGCCTA TCACACAAGC TCTTGAAAAA
TTCGAACTTG ACGACTACTA CTGGAGTGCC GTAAAAATGG GTGATAAGTA CGGGGCTAGA
GTTGCAAACG AACTTACTGA AGGATACTTT ATTAGGGCCC CAAAAGGAGT TAAAAAAACA
ATTCCCCTAC AAACTTGCCT TTTAATCGGT AGTGAAGAAG TTTCACAAAA CGTCCACAAT
ATCATTATTG TTGAAGATGG AGCTGAATTA AACGTAATTA CGGGGTGCAC CACATCCCCA
CACGTAAAAT CAGGACTTCA CTTGGGAGTT TCTGAAATAT ACATTGGAAA AAATGCAAAA
CTTACATTTA CGATGATTCA CAACTGGGGC GAAAACGTAC ACGTAAGACC CAGAACTGCA
ATAAAAATGG ATGATGATTC AATATTCATC AACAACTACG TTACAATGAT GCCTGTAAAA
TCAATTCAAA GTTACCCTAC AGCATACTGT GAAGGAAAAA ATGCTAAAGC AACATTCCAA
ACAATTGTAT ATGGAAAGGG TGACTCTAAA ATAGATATGG GATCAAAAGT CGTTCTTTCA
GGTGAACATT CAGCTGCAGA CATGATTTCA AGAGTTATTG TTGTAGATAA TGCAGAAGTC
ATCTCAAGAG GCCATCTTGT AGGTGCAGAA TCACACGTTA AAGGGCACCT CGAGTGTAGG
GGATTAATCT TATCAAATGA TGGACATATT TTAGCAGTTC CAGAACTTGA AGCTGAAAGA
ACTGACCTTG AATTGTCACA CGAAGCTGCA GTTGGAAAAA TTGCAGAAGA TCAGATCATG
TACCTGATGT CAAGAGGATT AAGTGAAGAT GAAGCAGCCT CATTGATTAT CAAAGGATTT
TTAAGCGTAG ACATTACAGG ACTTCCACCA GAACTTGCAA AATCCGTTAA AGAAATGATG
GATATGACCC TTGAAAATGC AATGTAA
|
|---|
| Protein sequence | MLSEKKLQQV REMAEKYKDV PAPFGEDIDL SMYPTPKENL LKVDSLNELS DDHKKALANV
GVDIEEKNTI GSYVQVNSDA IYTKMYSDII IMPITQALEK FELDDYYWSA VKMGDKYGAR
VANELTEGYF IRAPKGVKKT IPLQTCLLIG SEEVSQNVHN IIIVEDGAEL NVITGCTTSP
HVKSGLHLGV SEIYIGKNAK LTFTMIHNWG ENVHVRPRTA IKMDDDSIFI NNYVTMMPVK
SIQSYPTAYC EGKNAKATFQ TIVYGKGDSK IDMGSKVVLS GEHSAADMIS RVIVVDNAEV
ISRGHLVGAE SHVKGHLECR GLILSNDGHI LAVPELEAER TDLELSHEAA VGKIAEDQIM
YLMSRGLSED EAASLIIKGF LSVDITGLPP ELAKSVKEMM DMTLENAM
|
|---|
| |