Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC6_1492 |
Symbol | |
ID | 5737338 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C6 |
Kingdom | Archaea |
Replicon accession | NC_009975 |
Strand | - |
Start bp | 1397266 |
End bp | 1398354 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 641283993 |
Product | periplasmic binding protein |
Protein accession | YP_001549537 |
Protein GI | 159905875 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.104614 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTCTAA CAGTCGCACT CTGCGGTTGT ACTGAATCAT CAAGTAGTGC TACAGAAACT ATTGAAGAAA TAACTACTAT TACAGTTGTT GATGCTGCTG GAAGAACCGT TGAGGTTCCA CAAAATCCAG AAAAAATAAT TGCACTAAGT TGTGCTTTAA GAGAAGTTGT TTACCTCCAA GCACAGGATA AAGTTGTAGG TATCGAATTT AGGGAAGCTG CAAAAAGAAC TGATGGAACA TTCCCTTCAG GTTTAGAACT CCCATATCTT GCTGCATATC CTGAATTAAT GGATTTAACT GTTGTTAACG CAGGTAACAC AGTTAACGTT GAAGAAATTG CAAAACTTCA GCCAGATGTA ATATTTGTTG GAACTTCGGG TGCAGGCAGT GCAGAAGATA TTCAGGAAAA AACAGGAATT CCTGTTGTCA TTGTTTACGT TGCTACAGTT GGAACTGAAG CTCAGAATCA AAAGTACTAT GAAACTTTAG AGTTAATGGG TAAAGTTTTA GGAAAAAAAG AAAGAGCTGA TGAGTTAATC TCAATAATCA AAGAATACGA ATCTGATCTT GCTAATAGGG TAGCAGACAT TCCAGATGAA GAAAGACCTA CTGTTTACGT TGCAGGAAGA CCATACTGTG GAGTTCACGG TCTTGATGGA ACTGACCCAC ACTGGCCTTC ATTTGAATTC TTAAATGCCA ATAATGTAGC TTCAGGAGTA TCGGATGTCA GTGAAGGAAT TACAATAAAC AAAGAACAGG TCCTTGAATG GGATCCAGAA TACATCTTTG TAAGTGAAGC TTCGATGCAT TTAATAAATG AAGATTTAAA CGATCCTGCA TACCAAGGAT TGAGTGCAGT TCAAAATGGA AATATCTACG GAGTTCCGCC ATACTGCTGG TACTCATTCA ATAAAGAAAC AGGAATTGCA AACGCTTATT TCGTTGGTAA AACCATATAC CCTGAACAGT TTTCAGATAT CGATCCAGAA GCAAAAGCTG ATGAAATATA CGAAAAATTC CTTGGAAAAC CAGTATATTC AGTACTAAAA AGCCAGTTTG GAGGGTATAT TAAACTAACC AATAACTAA
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Protein sequence | MILTVALCGC TESSSSATET IEEITTITVV DAAGRTVEVP QNPEKIIALS CALREVVYLQ AQDKVVGIEF REAAKRTDGT FPSGLELPYL AAYPELMDLT VVNAGNTVNV EEIAKLQPDV IFVGTSGAGS AEDIQEKTGI PVVIVYVATV GTEAQNQKYY ETLELMGKVL GKKERADELI SIIKEYESDL ANRVADIPDE ERPTVYVAGR PYCGVHGLDG TDPHWPSFEF LNANNVASGV SDVSEGITIN KEQVLEWDPE YIFVSEASMH LINEDLNDPA YQGLSAVQNG NIYGVPPYCW YSFNKETGIA NAYFVGKTIY PEQFSDIDPE AKADEIYEKF LGKPVYSVLK SQFGGYIKLT NN
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