Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC6_1303 |
Symbol | |
ID | 5737273 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C6 |
Kingdom | Archaea |
Replicon accession | NC_009975 |
Strand | - |
Start bp | 1209644 |
End bp | 1210930 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 641283798 |
Product | elongation factor 1-alpha |
Protein accession | YP_001549348 |
Protein GI | 159905686 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG5256] Translation elongation factor EF-1alpha (GTPase) |
TIGRFAM ID | [TIGR00483] translation elongation factor EF-1 alpha [TIGR00485] translation elongation factor TU |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAAAG AAAAACCAAT TCTTAACGTT GCATTTATCG GACACGTAGA TGCTGGTAAA TCAACAACAG TAGGAAGATT ATTATTAGAC GGTGGAGCTA TCGACCCACA GTTAATCGTA AGATTAAGAA AGGAAGCTGA AGAAAAAGGT AAAGCTGGAT TCGAATTTGC TTACGTTATG GACGGTTTAA AGGAAGAAAG AGAAAGAGGA GTTACAATTG ACGTAGCTCA CAAAAAATTC CCTACCGCAA AATACGAAGT TACAATCGTA GACTGCCCAG GCCACAGAGA CTTCATTAAA AACATGATCA CTGGTGCTTC ACAAGCTGAT GCAGCTATCT TAGTTGTAAA CGTTGACGAT GCTAAATCCG GTATTCAACC ACAAACAAGA GAACACGTAT TCTTATCAAG AACACTCGGT ATCTCACAAT TAGCTGTTGC AATCAACAAA ATGGACACAG TAAACTTCTC AGAAGCTGAC TACAACGAAA TGAAAAAGAT GTTAGGCGAC CAATTGTTAA AAATGGTTGG ATTCAACCCT GCAAACATTA CATTCGTACC AGTTGCTTCA CTCCACGGTG ACAACGTATT CAAAAAATCC GACAGAACAC CATGGTACAA CGGACCTACA CTCGCAGAAG TTATCGATGC TTTCCAACCA CCTGAAAAAC CAACAACCTT ACCATTAAGA TTACCTATCC AAGATGTTTA CTCAATCACC GGTGTAGGTA CAGTTCCAGT AGGAAGAGTT GAAACAGGTA TCATCAAACC AGGAGACAAG GTTATCTTCG AACCTGCAGG AGCAGTAGGA GAAATTAAAA CCGTGGAAAT GCACCACGAA CAATTACCAA GCGCTGAACC AGGAGACAAC ATCGGTTTCA ACGTAAGAGG TGTTGGTAAA AAGGACATCA AAAGAGGAGA CGTTTTAGGA CACACAACAA ACCCTCCAAC AGTTGCTGCA GATTTCACAG CACAAATCGT TGTTTTACAA CACCCATCAG TTATGACTGT AGGTTACACA CCTGTATTCC ACGCACACAC AGCACAAATT GCATGTACAT TCATGGAATT ACAGAAAAAA TTAAACCCTG CAACTGGTGA AGTTTTAGAA GAAAATCCAG ACTTCTTAAA AGCTGGTGAC GCTGCAATCG TTAAATTAAT GCCTACAAAA CCATTAGTTA TGGAAAGCGT TAAAGAAATC CCGCAACTCG GTAGATTCGC AATCAGAGAT ATGGGTATGA CCGTTGCTGC AGGTATGGCA ATCCAAGTTA CAGCTAAAAA CAAATAA
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Protein sequence | MAKEKPILNV AFIGHVDAGK STTVGRLLLD GGAIDPQLIV RLRKEAEEKG KAGFEFAYVM DGLKEERERG VTIDVAHKKF PTAKYEVTIV DCPGHRDFIK NMITGASQAD AAILVVNVDD AKSGIQPQTR EHVFLSRTLG ISQLAVAINK MDTVNFSEAD YNEMKKMLGD QLLKMVGFNP ANITFVPVAS LHGDNVFKKS DRTPWYNGPT LAEVIDAFQP PEKPTTLPLR LPIQDVYSIT GVGTVPVGRV ETGIIKPGDK VIFEPAGAVG EIKTVEMHHE QLPSAEPGDN IGFNVRGVGK KDIKRGDVLG HTTNPPTVAA DFTAQIVVLQ HPSVMTVGYT PVFHAHTAQI ACTFMELQKK LNPATGEVLE ENPDFLKAGD AAIVKLMPTK PLVMESVKEI PQLGRFAIRD MGMTVAAGMA IQVTAKNK
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