Gene MmarC6_1154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC6_1154 
Symbol 
ID5738626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C6 
KingdomArchaea 
Replicon accessionNC_009975 
Strand+ 
Start bp1082057 
End bp1082725 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content34% 
IMG OID641283647 
Productchromosome segregation and condensation protein ScpA 
Protein accessionYP_001549199 
Protein GI159905537 
COG category[S] Function unknown 
COG ID[COG1354] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.339133 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGTTTG ACCTCTGGGT TAGAATCATC AAAGAAAGTA TTGAAAAAAA AGATGTTGAT 
CCATGGAATA TCAACATTTC TCAAATAACG GATGAATACC TTGGAACAAT AAAAGAACTT 
AGAAGATTTG ATATACGGCT GTCTGCCGAT GTTGTTTTAA TTGCAGGAAT TCTTTTAAGG 
TTAAAATCGC AGGTACTCTA TGGAGAATGT GAAACGGCAT TTAGCGAAGA AGAGGAAGAA 
GTCTACGAAG ATGATTATCG GGATGATGAT TATATCGAGC CCGAAATGGT GGAAAAACCC 
AAAAAAGAAA CTGCTAAAGA AGTTAATCCC GAAAGCATGA CGTTAGATGG GCTGATCAGT 
ACCCTTAAAA CGGAACTTAA AAAAATTAAG GATACAAAGC CAAGGAAAAA ACGAGAAGTG 
GTAAGGCCAA CTGCACTTTA TAATCTAGTT GAAGAAATGA TCGAAGAAGA CGATATTTCA 
GATATTATGG AATTTTTGGT TTTGGAACTT AAAAAATCAG GCGGTAAATT TACATTCCAG 
AATAAATTTA AGACAAGAGA AGAAATAATA AAGAATTTTT TGCCTGCACT ATACCTTGCA 
AATGACGGAA AAATTGATAT TGGTCAGGAA GATCTGTTTG AAGAGTTAAA TTTAGAATTA 
AAGAAATAA
 
Protein sequence
MEFDLWVRII KESIEKKDVD PWNINISQIT DEYLGTIKEL RRFDIRLSAD VVLIAGILLR 
LKSQVLYGEC ETAFSEEEEE VYEDDYRDDD YIEPEMVEKP KKETAKEVNP ESMTLDGLIS 
TLKTELKKIK DTKPRKKREV VRPTALYNLV EEMIEEDDIS DIMEFLVLEL KKSGGKFTFQ 
NKFKTREEII KNFLPALYLA NDGKIDIGQE DLFEELNLEL KK