| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_1070 |
|---|
| Symbol | |
|---|
| ID | 5738276 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C6 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009975 |
|---|
| Strand | + |
|---|
| Start bp | 1010535 |
|---|
| End bp | 1011344 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 269 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 641283561 |
|---|
| Product | alpha-L-glutamate ligase |
|---|
| Protein accession | YP_001549116 |
|---|
| Protein GI | 159905454 |
|---|
| COG category | [H] Coenzyme transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0189] Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) |
|---|
| TIGRFAM ID | [TIGR00768] alpha-L-glutamate ligases, RimK family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 0.642798 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATTG GAATATTGGC CCACAAAAAA ACGCCTGAAA ATTTAATGAT TTTCGAAGAA
CTTAAAAAAA GATGCAGTGT TGAATTTATC GATCCTCTAG AAGTTTTTTT ATGTTCTGGA
AACTATGAAT ATGATTTAAT TTTGTCAAGA GTTGAAAGAG ATTTTTTGAA AGAAGGAATT
CATGTTTTAA ATGATATTTC AGGAGATATT CCCGTCATAA ATTCAGTTGA AACTATTCAG
ACATGCCAGA ACAAATATTT TACCTACTTA AAATTAAAGA AAGTATCTCC AAAATCATTT
TTAACCTATT CAAAGGATAT TTCCGGAATT ATTGAAAAAA TAAATGCTAA TTTTGGATAT
CCTTGTGTTG TAAAGCCAAT ATATGGTGGA TACGGGGACG GAGTTTTGAA AATAACTTCT
GAAACTGAAT TTATTGAAAC TTTTAATAAA AAAGATGAAA GAAGTGAACT TTTCATTCAG
GAGTTTATTC CATACCTTCA TGACATTCGG GTTTTCGTGT TGAATAACGA AATCATCGGA
TCGATGGAAA GGATTCCAAA AAACAGCTGG AAAGCAAATT ATTCATTAGG TGCAGAAATA
AAGGAATTTA AACTATCAAA CGAAGTTGAG GAAATGGTTT TAGATTCAGT AAAAAAGTTG
GATGCAGATA TCGTTGGAAT CGATGTTTTA ATTTCAAAAG ATAAAACTTA CATTTTAGAA
GCAAATATCA CACCCCAATT TCGAGGAATG ATGAATTTTG TAAATGTTCC AGAAAAAATT
GCAGATTACT GTTTAAATTA CTTAAAATAA
|
|---|
| Protein sequence | MKIGILAHKK TPENLMIFEE LKKRCSVEFI DPLEVFLCSG NYEYDLILSR VERDFLKEGI
HVLNDISGDI PVINSVETIQ TCQNKYFTYL KLKKVSPKSF LTYSKDISGI IEKINANFGY
PCVVKPIYGG YGDGVLKITS ETEFIETFNK KDERSELFIQ EFIPYLHDIR VFVLNNEIIG
SMERIPKNSW KANYSLGAEI KEFKLSNEVE EMVLDSVKKL DADIVGIDVL ISKDKTYILE
ANITPQFRGM MNFVNVPEKI ADYCLNYLK
|
|---|
| |