| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_1058 |
|---|
| Symbol | |
|---|
| ID | 5738249 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C6 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009975 |
|---|
| Strand | + |
|---|
| Start bp | 1000546 |
|---|
| End bp | 1001298 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 641283550 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001549105 |
|---|
| Protein GI | 159905443 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2047] Uncharacterized protein (ATP-grasp superfamily) |
|---|
| TIGRFAM ID | [TIGR00162] conserved hypothetical protein TIGR00162 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTAAAAA TTACTGAGAA CAAATTAATT GACGCAGAAC CTTTAAAAGA TGCGGTTTTA
ATTGAAGGAC TTCCTGGAAT CGGGCACGTT GGAAGGGTGG CCGCAGAACA CATCGTTGAA
GAATTTAACG GTGAAAAAGT TCTAGAACTT TATTGCGACG ATTTTCCACC ACAAATCGTT
GTAAAAGACG ATGGAACAAT TGAATACATG AAAAATGAGT TCTATTTAAT AAAAGAACCG
GTTCCAATGG TAATTGTACT TGGAAATACC CAAGCATTAT CTCCAAAAGG ACAGTACGTT
CTTTCAGAAA GAATTGTAGA TATTGCAATG AAATATGGGG CTACAAAAAC ATACACGCTT
GGTGGATTTG GAATCGGAAG AATTTCAGAC GAGTTAAAAG TGTTTGTTGC GTCAACTTCA
AAAGAACTTT CAGAACAGCA CAAAGAACTT GGCGCAGAAT TTAGAACCGA TGGCGGAAGT
ATTATCGGTG CAGCAGGTTT AATGCTTAAA TTTTCAAAAT TAAAAGGAAT TGAAGGAATT
TGTTTAATGG GTGAAACTCC AGGTTACCTT GTTGACCCAA AATCTGCGGG AAATGTACTT
GAAATGCTTT CAAAAGCAAT CGGGTTTGAA ATCGACATGA AAAAACTCGA TGAAAGAGCA
AAAGAAATGG AAAAATTCTT AGAAAAAGTG CAGATGCAGG AGCAAGGAAT GCAAGCTCCA
CAAAATACCG ATGACTTAAG CTACATCGGA TAA
|
|---|
| Protein sequence | MVKITENKLI DAEPLKDAVL IEGLPGIGHV GRVAAEHIVE EFNGEKVLEL YCDDFPPQIV
VKDDGTIEYM KNEFYLIKEP VPMVIVLGNT QALSPKGQYV LSERIVDIAM KYGATKTYTL
GGFGIGRISD ELKVFVASTS KELSEQHKEL GAEFRTDGGS IIGAAGLMLK FSKLKGIEGI
CLMGETPGYL VDPKSAGNVL EMLSKAIGFE IDMKKLDERA KEMEKFLEKV QMQEQGMQAP
QNTDDLSYIG
|
|---|
| |