| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_1034 |
|---|
| Symbol | |
|---|
| ID | 5738194 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C6 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009975 |
|---|
| Strand | + |
|---|
| Start bp | 980846 |
|---|
| End bp | 981538 |
|---|
| Gene Length | 693 bp |
|---|
| Protein Length | 230 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 641283526 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001549081 |
|---|
| Protein GI | 159905419 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2043] Uncharacterized protein conserved in archaea |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAATTC AAAAAATCAA AGAACTTGGA AAAAAACTTC AAGACTATTT AGGACTCGAA
AAACCTGCAA CAGCAGTTAA ACTCGCAAAA TCAAAAGAAG AAATTCCAGA AGGCTACACT
GAAATAGAAA CGCCTGTAAG ACACTGTGAA ATGATTCAAA ATGCAAGAAT TGAAGGTAAA
AAGTTCTACG CAACAGCTGA AAAACATGCA TGTAAAGGTG GAGCATATGC AATTGGATTA
TTACAGAACC CTCCAGAACC ATTAAAAACA GGTGTTTTAT ACCACAATTT AGGAAATTTC
CCAACAGAAG AAGCTGCAAT TAAAACTGTT GAGGCAATTC CAAGAGTTAA AGAAGAAATT
TACGCAGGAG TTTACGCGCC ATTAAATGAC GCAGACTTTG AACCTGATAG CATTGTAGTT
TTAGTAACCC CAAAACAGGG TTTAAGACTT ACTCAAGCTT TAAATTACAC AGCAGGAGGT
AGATTCCAGG CAGATTTTGC AGGAATTCAA TCTTTATGTG CTGATGCAGT AGCTGCAGTA
AAAACAAGAG GTGTTGCAAA CGCAACACTT GGATGCAACG GTTCAAGGGC TTACGCACAC
GTTAAAGACG ATGAACTCGT ATTTGCATTC CCACTTTCAG ATTTAGAAAA CGTAGTTTCA
GCACTTGAAT ACTTCAAAGA AAAATGGAAT TAA
|
|---|
| Protein sequence | MEIQKIKELG KKLQDYLGLE KPATAVKLAK SKEEIPEGYT EIETPVRHCE MIQNARIEGK
KFYATAEKHA CKGGAYAIGL LQNPPEPLKT GVLYHNLGNF PTEEAAIKTV EAIPRVKEEI
YAGVYAPLND ADFEPDSIVV LVTPKQGLRL TQALNYTAGG RFQADFAGIQ SLCADAVAAV
KTRGVANATL GCNGSRAYAH VKDDELVFAF PLSDLENVVS ALEYFKEKWN
|
|---|
| |