Gene MmarC6_1004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC6_1004 
Symbol 
ID5738550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C6 
KingdomArchaea 
Replicon accessionNC_009975 
Strand- 
Start bp950475 
End bp951104 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content37% 
IMG OID641283490 
Productflagellin 
Protein accessionYP_001549051 
Protein GI159905389 
COG category[N] Cell motility 
COG ID[COG1681] Archaeal flagellins 
TIGRFAM ID[TIGR02537] archaeal flagellin N-terminal-like domain 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value0.790053 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAT TCATGAAAAG CAAAAAAGGT GCTGTTGGAA TTGGTACCTT AATAATTTTT 
ATTGCAATGG TATTAGTTGC AGCAATTGCT GCATCAGTAA TAATTAATAC TGCTGGAAAA 
CTTCAGCATA AAGCTTCAAC AGTTGGAGAC GAAAGTACCG AACAGGTTGC AAGTGGAATA 
CAGGTTTTAA AAGTAATTGG ACATGCAGAT ACCAGAACTT CACTTGATAA AATGGCAATC 
ATGGTTGCAC CAAATGTTGG CGGAGAAATC GATCTTTCAA CGACAATTCT TACATTGGGT 
ACTGGAGATG CAAAATATTC TCTTGTTTAC GACAGTGATG AATACAATTC GGATGTAAAA 
GATGACGGAT CAAGCAGTAT TTTTGATACC GCAGAATGGG GTGCAGCCAG TAAATACGGT 
TTAATCGTTT TACAGGATAG TGACAATTCA ACCTCTGAAT CTACACACCC AACAATAAAT 
TACGGTGACA AAGTATACCT TACAGTTGCT ATGTCAATTA ATTCAACTTC AAAAGTTTCC 
GGAGAAGTAA TCCCTGATTA CGGTGCTTCT GGAATCGTTG AATTTAGGGC TCCATCAGTA 
TTCACTGAGA CAGTAGTTGC ACTTCAATAA
 
Protein sequence
MKKFMKSKKG AVGIGTLIIF IAMVLVAAIA ASVIINTAGK LQHKASTVGD ESTEQVASGI 
QVLKVIGHAD TRTSLDKMAI MVAPNVGGEI DLSTTILTLG TGDAKYSLVY DSDEYNSDVK 
DDGSSSIFDT AEWGAASKYG LIVLQDSDNS TSESTHPTIN YGDKVYLTVA MSINSTSKVS 
GEVIPDYGAS GIVEFRAPSV FTETVVALQ