| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_0969 |
|---|
| Symbol | |
|---|
| ID | 5738770 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C6 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009975 |
|---|
| Strand | - |
|---|
| Start bp | 918439 |
|---|
| End bp | 919452 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 641283455 |
|---|
| Product | homoserine dehydrogenase |
|---|
| Protein accession | YP_001549016 |
|---|
| Protein GI | 159905354 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0460] Homoserine dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATAA TTCTTGTAGG ATTTGGAATA ATTGGTAAGG GCGTTTTAAA GGCCATTACC
CTCAAATCAG AACACCTGAA AAACAGATAT GGAATGGATT TAAAAGTTGC TGCAATTTGT
GATAGAAGCG GTGCTGCAAT TGATGAAAAC GGTCTCAATT TAGAATTGGC TTTGAAAGTT
AAAGAAGAAA CCGGAAAAAT AGCAGATTAT CCTGAAAAAG GATGCGAAAT GGGCATTTTA
GAAGTTATCG AATCAGTAAA TGCGGATGCT GTTGTCGAGG TAAGCCCCAC AAACATTGAA
ACAGGCGAAC CTGCAAAATC ATACATGCTA AAAGCATTTG AAACCAAAAA ACACGTAGTA
AGCGCAAACA AAGGTCCCCT CGCAGTTTCA TTTAAGGAAT TGGTAAAATG CGCAGAAGAA
AATAAAGTTT GTTTCAGATA CGAAGCTTCA GTCGGTGGCG CAATGCCGAT AATCAATCTT
GCAAAGGAAA CACTCGCAGG AAATGATATT AAATTGATAA AAGGAATCTT AAACGGGACT
ACAAACTACA TACTAACTAA AATGGAAAAA GAGCAGCTTG ATTTTGATAT GGTATTAAAA
GAAGCTCAAG AACTAGGAAT TGCTGAAACA AACCCCCACC AGGATATCAG CGGATTGGAT
ACTGCTGCAA AAATTGTAAT TTTGGCAAAT TCGATATTTG GAAGAGATGT AACAATCAAA
GACGTAAATT TAGAAGGAAT TACAAGAATT ACACCTGAAG CACTTGCTAT GGCAAATAAA
AGCGGCCACA CGATAAAATT AATAGGCGAA GTTACTGACA AAAAACTTGA AGTATGCCCA
AAACTTGTAC CTATTGACAG CCCCTTAAAC GTTAAAGGAA GTTTAAACGT TGCTATGGTT
AGTACAGATC TTGCAAAAGA TATCGTGGTT GTTGGAACCG GTGCCGGGGA CATTGCAACT
GCTTCTGCAA TATTAAGCGA TTTAGTAAAT ATTCACCAGA CACTGAAAAA ATAA
|
|---|
| Protein sequence | MKIILVGFGI IGKGVLKAIT LKSEHLKNRY GMDLKVAAIC DRSGAAIDEN GLNLELALKV
KEETGKIADY PEKGCEMGIL EVIESVNADA VVEVSPTNIE TGEPAKSYML KAFETKKHVV
SANKGPLAVS FKELVKCAEE NKVCFRYEAS VGGAMPIINL AKETLAGNDI KLIKGILNGT
TNYILTKMEK EQLDFDMVLK EAQELGIAET NPHQDISGLD TAAKIVILAN SIFGRDVTIK
DVNLEGITRI TPEALAMANK SGHTIKLIGE VTDKKLEVCP KLVPIDSPLN VKGSLNVAMV
STDLAKDIVV VGTGAGDIAT ASAILSDLVN IHQTLKK
|
|---|
| |