Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC6_0880 |
Symbol | |
ID | 5738324 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C6 |
Kingdom | Archaea |
Replicon accession | NC_009975 |
Strand | - |
Start bp | 820002 |
End bp | 821237 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 641283355 |
Product | ammonium transporter |
Protein accession | YP_001548927 |
Protein GI | 159905265 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0004] Ammonia permease |
TIGRFAM ID | [TIGR00836] ammonium transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.0728502 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGACGG CAGATCTATT CAATAATCCA TCAAATATTA TGGATGCGTT AAACACGCTT GCAAATTCAA GCGATGTAAT GTTTTTAATT TTTACCGGTG CTTTTATCTT CATAATGCAC TTAGGATTTG CAATGCTTGA AGGCGGTCAG GTTCGTGAAA AGAACGTGAA CAACGCAATG ATGAAGAACA TGGGTGACTG GATCATCGGA TGTATTTCCT GGCTTTTGGT CGGTTCAGTA ATTGCTAGAA CATTAAACCC TGCAGAATTT GTTTTATGGT GGGGAAAAAT TGCAAGTGCA ACACCGTTTC TTACAAATAA TGGATTTGAA CTTGCAAACT GGTTTTTAGG ACTTGTATTT GCGGCAACTG CAGCAACTAT CGTTGCAGGG GGAATTGCAG AGAGAATTAA GTTTAAATCA TACATCATGA TTTCAATTGT AATAACAGCA TTATTATATC CATTTTTCGT GTACCTTGGA CCATGGGGCG CAAGTATAAT TCCATTCCAC GACTATGCAG GAAGCTTGAT GGTTCACGGT GTTGGAGGAT TCTTATCACT TGGTTTAATT GCAGCAATCG GCCCAAGAGT CGGAAGATTC GTAAACAAAA AAGCAATAAC AATTCCTGGA CACAACATCC CTATGTCAAT TCTCGGTGCA TACATTCTTG CATTTGGATG GTACGGATTT AACGTTGGAA GTTCACTCGC TTTAAGCGAT ATTTCTGGAT TAGTATGTGC AACAACAACG CTTGCAATGG CAGGTGGGGG TCTTGGGGGA TGTTTATTCT CTAAAAATGA TGTTTTATAT ACTGCAAATG GACTTCTCGC AGGAACTGTT GCAATCTGTG CAGGAACTGA TATCGTAAGT CCGCTTGGAG CTTTAATAAT TGGATTTATC GCAGGCTCTC AGGTTCCAAT GGTCTTCAAA TTTGTTGAAA AATTGGGACT CGATGACGTA TGCGGTGTAA TTCCTGTACA CGCAACTGCC GGAACTCTTG GTGCGATTTT GGCAGGAGTA TTTGGAATGA CTGCATTCGG TGGAGTTGGT GGAATCAACC TTACAGAACA GATCATTGCA GCATTGATAT GTGCCTTTTA TGGTACTGGT GCAGGATTCC TTTTAGGAAA AGTAATTGGG GTAGTTACTG GTGGTTTAAG AGTTAAAGAA GATGAAGAAA GAGCTGGACT TGATATTTCA ATCCATAAAC TCCCAGCATA CCCGAAAGAA AACTAA
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Protein sequence | MVTADLFNNP SNIMDALNTL ANSSDVMFLI FTGAFIFIMH LGFAMLEGGQ VREKNVNNAM MKNMGDWIIG CISWLLVGSV IARTLNPAEF VLWWGKIASA TPFLTNNGFE LANWFLGLVF AATAATIVAG GIAERIKFKS YIMISIVITA LLYPFFVYLG PWGASIIPFH DYAGSLMVHG VGGFLSLGLI AAIGPRVGRF VNKKAITIPG HNIPMSILGA YILAFGWYGF NVGSSLALSD ISGLVCATTT LAMAGGGLGG CLFSKNDVLY TANGLLAGTV AICAGTDIVS PLGALIIGFI AGSQVPMVFK FVEKLGLDDV CGVIPVHATA GTLGAILAGV FGMTAFGGVG GINLTEQIIA ALICAFYGTG AGFLLGKVIG VVTGGLRVKE DEERAGLDIS IHKLPAYPKE N
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