| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_0624 |
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| Symbol | |
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| ID | 5738887 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C6 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009975 |
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| Strand | - |
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| Start bp | 572722 |
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| End bp | 574239 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 641283090 |
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| Product | thymidine phosphorylase |
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| Protein accession | YP_001548673 |
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| Protein GI | 159905011 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0213] Thymidine phosphorylase |
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| TIGRFAM ID | [TIGR02645] putative thymidine phosphorylase
[TIGR03327] AMP phosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.751254 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTATTTT TAAATGCAAA ATTCATAGAT CTTGATCTGG GTGAAAATGC GGTAATTGTT
AACGATGAGG ATTTAAAGGG AACCTCGTAC TACCCGCAAG ATCGGGTATT GATAGAGTCA
CACGCAGGTG CTGTGATTGG AAACATCTAT TCCACAAAAA CTATGGTTAA AAAAGGCGAA
GTTGGAATGC TTGTTAAAGA ACTTAAAGAA GTTTCTATCT CAGAAGGGGA AGAGGTAAAA
TTAAGGCATG CAGAGAAGCC AGAATCAATT CCATTTATAA AAAAGAAGAT GGATGGTCAG
GTTTTAAATC CACATGAAAT AAGAACGATA ATCGATGAAA TCGTATCTAA AAAACTCTCA
AACATCGAAT TATCCGCTTT TGTTTCATCT ACGTATATAA ATGGAATGAA TATGGATGAA
ATAAGCGAAA TGACCAAGAG AATTGCAGAA ACCGGAGATA TGATTTCCTG GGAAAAGAGT
CTTGTTGTAG ACATTCACAG TATTGGTGGA GTTCCCGGAA ATAAATACGC CTTACTTTCA
ATCCCGATAC TTGCAGCAGC AGGAATCACA ATTCCAAAAA CGTCATCTAG GGCAATAACA
TCTCCAGCAG GAACTGCAGA TGTAATGGAA GTACTCACAA ATGTTGAATT AAAAGAAGAA
GAAATAAAAA GAATAGTAAA AACTACAAAC GGATGTCTTG CATGGGGTGG TGGTGTAAAT
CTAGCGCCTG CTGACGATAT TATCATAAAT GTAGAACGAC CGGTTTCAAT AGACCCTCAA
CCTCAGCTTC TTGCAAGTGT TATGGCAAAA AAGATTGCAA CAGGAATTAA ATATACTGTA
ATAGATATTC CTGTTGGAAA AGGAGTAAAA ATTAAAAATG AGGCGGAAGG AGCAAAATTA
GCGAGGAAAT TTATTGAACT TGGAGAATTG TTAAATATTA AGGTAGAATG TGTCTTAACT
TACGGCGGAC AGCCTCTTGG AAGGGCAATT GGACCTGCAC TCGAAGCAAG AGAAGCAATT
GAAGCACTTC AAGATCCAAA AAATGCTCCA AAAAGTTTAA TTGAAAAAGC ACTATCGCTT
GCAGGAATTC TTCTTGAACT CGGTGGTGCT GCACAGATTG GGGAAGGTCA GAAACTTGCA
TGGGAAATTT TGGAATCCGG AAGGGCTCTT GAAAAATTCA ATCAGATTAT AACTGAACAG
GGTGGAACTC CGAAAAAACC TGAAGAAATA GAACTTGGAG AATACGTTGA AGAAATTATT
GCTCCAATTG ATGGATACAT TACCGATATA AGTAATACTG CAATTACAAA CGTGGTTAAA
GAAGCTGGAG CTCCAAGGGA CAAAAAAGCA GGAATATTAT TGAATTCAAA GATTGGAAAT
CAGGTCAAAC AGGGGGATAT ATTATATACA ATTTATTCTG GTTCAGAAGA ACGGCTAGTT
TCAGCAGTAA ATCTTGCAAG AAGAGTTTAT CCTGTAAAAG TTGAAGGAAT GCTTATCGAG
AGAATAAGCA AATTCTAA
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| Protein sequence | MLFLNAKFID LDLGENAVIV NDEDLKGTSY YPQDRVLIES HAGAVIGNIY STKTMVKKGE
VGMLVKELKE VSISEGEEVK LRHAEKPESI PFIKKKMDGQ VLNPHEIRTI IDEIVSKKLS
NIELSAFVSS TYINGMNMDE ISEMTKRIAE TGDMISWEKS LVVDIHSIGG VPGNKYALLS
IPILAAAGIT IPKTSSRAIT SPAGTADVME VLTNVELKEE EIKRIVKTTN GCLAWGGGVN
LAPADDIIIN VERPVSIDPQ PQLLASVMAK KIATGIKYTV IDIPVGKGVK IKNEAEGAKL
ARKFIELGEL LNIKVECVLT YGGQPLGRAI GPALEAREAI EALQDPKNAP KSLIEKALSL
AGILLELGGA AQIGEGQKLA WEILESGRAL EKFNQIITEQ GGTPKKPEEI ELGEYVEEII
APIDGYITDI SNTAITNVVK EAGAPRDKKA GILLNSKIGN QVKQGDILYT IYSGSEERLV
SAVNLARRVY PVKVEGMLIE RISKF
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