Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC6_0595 |
Symbol | |
ID | 5738833 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C6 |
Kingdom | Archaea |
Replicon accession | NC_009975 |
Strand | - |
Start bp | 547290 |
End bp | 547835 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 641283058 |
Product | hypothetical protein |
Protein accession | YP_001548644 |
Protein GI | 159904982 |
COG category | [S] Function unknown |
COG ID | [COG4743] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.0289199 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATAAAG AATTTCTAAA TAAGGTTTTA ACCGGTTTTT TACTCATTGT GTTGATAGTA TCAATAATGG GCGTTGTATA CATCATAAAA AATCCAAAAC AGTCGGAATA TTTTTCTGAA TTTTATATTC TTGGAAAAAA TAATATGGCG TATGACTATC CAAACGAACT TTATTCTGGA GAAACCGGTT ATCTGACAGT TGGAATTGTA AACCACGAAG GAAGAAATGT TACCTATTAC GGTGAAACGT GGCTAATAAA GACTAATCCT GGCAATATTT CAGAAATTGA TGTGAATAGT GCAGTAATTA TGGATAGCTA TTCAGTTACG CTCGAACCAG AACCATTAAT TGTCGAAGGC GACTGGGAAT CTCAATTTGA AAAAAATTAC AGCTTTTCAA TAAATGACTC TGGAAACTAC CAGATGTGGT TTTTTTTGTT CAAAGACAAT GTTTCGGAAG ATAATATTTC AAAAAAATTA CAGAATGCAA AGAACAATAC TCTACTCAGT CTAAAATTAA ACATTGCTGT TTCGAACTGG ACTTAA
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Protein sequence | MDKEFLNKVL TGFLLIVLIV SIMGVVYIIK NPKQSEYFSE FYILGKNNMA YDYPNELYSG ETGYLTVGIV NHEGRNVTYY GETWLIKTNP GNISEIDVNS AVIMDSYSVT LEPEPLIVEG DWESQFEKNY SFSINDSGNY QMWFFLFKDN VSEDNISKKL QNAKNNTLLS LKLNIAVSNW T
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