Gene MmarC6_0580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC6_0580 
Symbol 
ID5738802 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C6 
KingdomArchaea 
Replicon accessionNC_009975 
Strand
Start bp530388 
End bp530987 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content34% 
IMG OID641283043 
Producthypothetical protein 
Protein accessionYP_001548629 
Protein GI159904967 
COG category[S] Function unknown 
COG ID[COG2860] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.257402 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATAA TCGGCCTTTT AGCATTTGCA GTTGTAGGTG CACTAAAAGG AATTAAAAAA 
GGTTTAGATT TACTTGGAAT AATAGTTCTT GGAATAATGA CTGCACTCGG AGGAGGAATT
ACAAGGGATT TACTTGTAAA TACAATTCCT TATGCGTTAA GGTCGCCAAA CGACATGGGT
GTTGCATTAA TTGGAGTTTG GAGCGCAATA ATAATTTTTA AAGTTTTTAA AGATGATGTA
AGCAATAAAT ATGTTATACA GATTCCTGAT GCAATCGGTC TTTCCGCATT TACAACAACC
GGTGCAATAA TTGCATATAA CTTTGAAGTA TCATTTTTTG GAATAATCAT ACTTGCAACA
TTGACTGGAG TTGGTGGTGG GATAATAAGT GATATATTGT TGCAAAAAAC CCCTTCTGCA
TTGACTGAAG ACTTTTACGC AAGCTGTTCC ATAATTGGCG CAATTGCATT TTATTTGGCA
ATTTTATCAA ACTTAAGTCT CGAAGCAAGT GCAGTTATTT GCTGTATCGT TGTTTTAATG
ATTAGAATTG TTGCAATGCT CTGTAAATGG AGCCTTCCAA AATTTTATAA CGAAAAATAA
 
Protein sequence
MNIIGLLAFA VVGALKGIKK GLDLLGIIVL GIMTALGGGI TRDLLVNTIP YALRSPNDMG 
VALIGVWSAI IIFKVFKDDV SNKYVIQIPD AIGLSAFTTT GAIIAYNFEV SFFGIIILAT
LTGVGGGIIS DILLQKTPSA LTEDFYASCS IIGAIAFYLA ILSNLSLEAS AVICCIVVLM
IRIVAMLCKW SLPKFYNEK