| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_0341 |
|---|
| Symbol | |
|---|
| ID | 5739091 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C6 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009975 |
|---|
| Strand | - |
|---|
| Start bp | 305291 |
|---|
| End bp | 306202 |
|---|
| Gene Length | 912 bp |
|---|
| Protein Length | 303 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 28% |
|---|
| IMG OID | 641282805 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001548394 |
|---|
| Protein GI | 159904732 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5006] Predicted permease, DMT superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATATTCG CGAGTTATAC AATGAACAAA GTAAAAGGAA CTGCATATAC CATGTATTCA
TCCGTTGCAT TCGGTATAAT GCCTTTTTTA ACTAAATTTG CATATGATGG TGGAGCAAAT
GCAGTTACTA CACTAATGTT TCGTTTTTTG ATTGCAGGAT TAATTTTATA TGTATTTTTA
AAATTTAAAA AAATAAACTT AAAAATTTCA AAACATAATT TTGTAGAAAT TTTATTTTAC
GGCGCATTTT TGTACGCTTT AAACACAGTA TTTCTTTATG AAGCTTATAA TTCTATACCG
ACAGGTGTTG CAACAACATT ACACTTTATC TATCCTGTAA CCGTTACATT ATTAATGTTA
CTCATTTTTA AGGAAAAGAT GGGAATAAAT AAAGCTTTTG CACTTATTTT TTCATTTTTA
GGAATGTACT GTTTAGTTGG TGGAAATTGT GCAGGTTTTG ATATTTATGG GGTATTGCTT
GCAGCAGGTT CAGGTTTAGT TTATGCGGGA TACATTGTTT CTGCTGGAAA ATGTAGGTAT
TCAAAAATAG ACTCGTATGT AACCATATTT TATCTATCAA TTTTATCTTC AGTTTTACTT
TTTATGTATG GCTTATTTAC AAATACTTTA ACAATAAATA TGGCATTTTC AAGCTATGTT
TCAATTGGAA TTATTTCAAT ATTTTGTACA GTTGTGGCAT TGATTGCATT TTTAGAAGGA
ATAAAATTGA TAGGTCCATC TAATACTGCG ATATTGAGCA CATTAGAACC AATAGTGAGT
ATAATTCTTG GTATAATTTT ATTAAATGAG GTAATGAGTT TTAAAATTGG ATTTGGAAGT
ATTTTAATTT TAATTTCTGT AATAATCGTT ACACTTGAAA AAAGTAAAGT TCCTAAAATC
ATTGAAAATT AA
|
|---|
| Protein sequence | MIFASYTMNK VKGTAYTMYS SVAFGIMPFL TKFAYDGGAN AVTTLMFRFL IAGLILYVFL
KFKKINLKIS KHNFVEILFY GAFLYALNTV FLYEAYNSIP TGVATTLHFI YPVTVTLLML
LIFKEKMGIN KAFALIFSFL GMYCLVGGNC AGFDIYGVLL AAGSGLVYAG YIVSAGKCRY
SKIDSYVTIF YLSILSSVLL FMYGLFTNTL TINMAFSSYV SIGIISIFCT VVALIAFLEG
IKLIGPSNTA ILSTLEPIVS IILGIILLNE VMSFKIGFGS ILILISVIIV TLEKSKVPKI
IEN
|
|---|
| |