| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_0271 |
|---|
| Symbol | |
|---|
| ID | 5738826 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C6 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009975 |
|---|
| Strand | - |
|---|
| Start bp | 246615 |
|---|
| End bp | 248210 |
|---|
| Gene Length | 1596 bp |
|---|
| Protein Length | 531 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 641282735 |
|---|
| Product | methyl coenzyme M reductase system, component A2 |
|---|
| Protein accession | YP_001548324 |
|---|
| Protein GI | 159904662 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
|---|
| TIGRFAM ID | [TIGR03269] methyl coenzyme M reductase system, component A2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTATTGT TGGAAGTGAA AAATGTTTCA AAGAGTTATG GGGACGTGGA AGTACTAAAA
AACGTAAACT TTGAATTAAA CGAAGGGGAA GTTATCGGGG TTTTAGGTAG AAGTGGTTCT
GGAAAATCCG TGCTTTTACA TATGTTAAGA GGTATGGAGG GGTATGATCC TACTTCTGGA
CAGATTATAT ATCACGTTGC TTACTGCCCA AGATGTGAAA ATGTCGAAGT TCCTTCACAA
GTTGGAAAAA AATGCGACTG TGGAAAAGAA TATGTCGCAA AATCAGTAGA TTTTTGGAAC
CAAAATGAAA TCACATATTC ATTGAAGAAA AAAATTGCGA TAATGCTCCA GAGAACTTTT
GCACTTTACG GAGAAAAAAC CGTTGCAGAA AACATTATGG AAGCATTAAC TGCCGCAGGA
CATGATGGAA AAACTGCTAC AGAATGGGCA TTAAATCTTA TCAAAATGGT AAAACTGGAA
CACCGGATCG CGCACATTTC AAGAGATTTA AGTGGTGGGG AAAAACAGAG AGTTGTTCTT
GCAAGACAGA TTGCAAAAAA TCCGGTTATT TTCCTTGCAG ATGAACCTAC AGGAACACTT
GATCCACGAA CTGCAAAATT CGTTCACAAT GCACTTACCG AAGCAGTTAT AAAACACAAT
ATTGCAATGG TCATTACTTC ACACTGGCCA GAAGTAATCG AAGAACTCTG TCAAAAAGCA
GTATGGCTTG ATAAGGGTGA AATGAAGCTT TTGGGGGAGA GTAAATCCGT TGTAAAAGAA
TTCATGAAAA CCGTTACTTC AATGAAAGAA TTTGAAAAAG TTGAAGTAAA AGATGAACTT
ATAACTATTG AAAACGTTGA AAAACGGTAT GTTTCAGTTG ACAGGGGTAT TGTAAAGGCT
GTTGATGGAA TAAACCTTTC AATAAATGAA AAAGAAATTT TCGGGCTTGT TGGTGTAAGT
GGGGCCGGTA AAACCACACT TTCAAAGATA ATTGCCGCAG TAATTCCCCC TTCAAAAGGA
AAATACGAGT TCAGACTCGC TGATGAATGG GTTGACATGA CTAAAGTTGG CCCATTATTC
AGGGGACGTG CAAAAAGATA CATTGGAATG TTATTCCAAG AATACAGTCT TTATCCGCAC
AGAACAATTC TTTACAATTT GACAGAATCA ATAGGCCTTG AAATGCCTGG TGAATTTGCA
AAAATGAAAG CAGAACACAC ATTAGTTTCT GTTGGATTTA CCGAAGAAGA AGCTGAAAAA
ATGCTTGATA AATACCCTTC AGAACTCAGT GTTGGTGAAA AGCACAGGGT TGCACTCGCG
CAAGTTTTAA TTCGTGAACC GCACTTGATC CTTTTAGATG AACCTACTGG AACCATGGAT
CCAATAACAA GAAACCAGGT TGCAGAATCC ATTCAAAAAT CAAGAAGCGA ACTCGATCAA
ACATACGTTA TCGTATCCCA CGATATGGAC TTTGTATTAA ACGTATGTGA CAGGGCTGCC
CTTGTAAGGG GTGGGAAAAT AATTAAAACC GGAAAACCTG ATGAAATCGT AAAAATATTG
TCAGAAGAAG AAAAAGACGA AATGATAGGC CATTAA
|
|---|
| Protein sequence | MLLLEVKNVS KSYGDVEVLK NVNFELNEGE VIGVLGRSGS GKSVLLHMLR GMEGYDPTSG
QIIYHVAYCP RCENVEVPSQ VGKKCDCGKE YVAKSVDFWN QNEITYSLKK KIAIMLQRTF
ALYGEKTVAE NIMEALTAAG HDGKTATEWA LNLIKMVKLE HRIAHISRDL SGGEKQRVVL
ARQIAKNPVI FLADEPTGTL DPRTAKFVHN ALTEAVIKHN IAMVITSHWP EVIEELCQKA
VWLDKGEMKL LGESKSVVKE FMKTVTSMKE FEKVEVKDEL ITIENVEKRY VSVDRGIVKA
VDGINLSINE KEIFGLVGVS GAGKTTLSKI IAAVIPPSKG KYEFRLADEW VDMTKVGPLF
RGRAKRYIGM LFQEYSLYPH RTILYNLTES IGLEMPGEFA KMKAEHTLVS VGFTEEEAEK
MLDKYPSELS VGEKHRVALA QVLIREPHLI LLDEPTGTMD PITRNQVAES IQKSRSELDQ
TYVIVSHDMD FVLNVCDRAA LVRGGKIIKT GKPDEIVKIL SEEEKDEMIG H
|
|---|
| |