| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_5119 |
|---|
| Symbol | |
|---|
| ID | 5737077 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009973 |
|---|
| Strand | + |
|---|
| Start bp | 159319 |
|---|
| End bp | 160482 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641282284 |
|---|
| Product | NLP/P60 protein |
|---|
| Protein accession | YP_001547875 |
|---|
| Protein GI | 159901629 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.553866 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCACCC GCTTCCGACT CGTCGGACTT GTCATAATCG TTTTCTTGAG TGGTTGTGGA
GGTCGCCCGC TTCCGGCGGC TTCCACCCAT CCCATCACGG GCAAGCCGCA GTGGTGGTGT
CCAACTCCGG TCATGGCAGG CGATCCGACC GCGATTGCCG CCATGCCGAC GGTGACACCC
TACTATCACC GTGACCAGTT CATGCTTGGC CAAGACGTGC TCAGCAATGG GTTGCGCGTG
ACCGTGCATG GCATCACCAG CGGCGAGGAA GCGCCTGAAG CCATTGGCGG GGGCCAGGTG
CAGTGGGTCG ATCTCGAACT CACCAGCGCG GTGTCGTTGC CGCTTGATCT GGCGGCGCAG
GTCGTCATTC GTGAGGTCGA GCAGGAAGCA GGACAAGCGG CACGCGGCTG GTGGACAACC
GACACCGCGA CGCTGGCCAC GACCGCGATT ACCCTGCCCA CGCGGCTGGA AGCAGGCATT
TCATGGCGCG GGTCGATTCC GATTCGTACC CCGATTGGTA CGCCCGTGTT TGTCCTGATC
TACCGCACGC CTGCCGATGC GCTGCTGCGG GAGCAGCCGA CCGATGGCGT AATCGTGGTG
CAGAATCGCC GCGACCCGAC CTGTGCGGGC AATATCGCGC GGGTTCCCTT CCCGACCATG
CCCGCAGGCG GTGGATCAGG TGCGCCGATT AACGGGACAC CCATCGCCGT TCCACCAGGC
ACGAATCCAC TCGTGGCTTA CGCGGTCAGC AAGCTGGCAT GGCCCTATGT CTGGGGTGGC
GAAAGCGAGG CCGAAGGCGG CTTTGACTGT TCAGGGCTGA TGTACGCCGC CTATGGCAGT
GTCGGCCTGA CGATTCCGCG CACCTCACAG GCGATGTGGC AGAGCGCCCA GCTGCAACGG
ATTGGCATCA GCGAGCTGCG ACCGGGTGAT CTGGTCTTTT TCCACACCGA TAGCAGCCGC
TTTAGCAGCC CGCCAACCCA TGTGGGGATG TATATCGGTG ATCTGAATGG CAATGGCACA
CCCGATTTAG TCCATGCCCT CAGTCCGGCG TGGGGTATTC GGATTGAGGA TAACTGGCTC
ACCAAGCCGT GGCTGGTGGC CCCATGGCCC GATGGCACGC CCCGTTTGTG GGGGGCTGGC
TACTTTGTGA ATCCGTATCG GTAG
|
|---|
| Protein sequence | MSTRFRLVGL VIIVFLSGCG GRPLPAASTH PITGKPQWWC PTPVMAGDPT AIAAMPTVTP
YYHRDQFMLG QDVLSNGLRV TVHGITSGEE APEAIGGGQV QWVDLELTSA VSLPLDLAAQ
VVIREVEQEA GQAARGWWTT DTATLATTAI TLPTRLEAGI SWRGSIPIRT PIGTPVFVLI
YRTPADALLR EQPTDGVIVV QNRRDPTCAG NIARVPFPTM PAGGGSGAPI NGTPIAVPPG
TNPLVAYAVS KLAWPYVWGG ESEAEGGFDC SGLMYAAYGS VGLTIPRTSQ AMWQSAQLQR
IGISELRPGD LVFFHTDSSR FSSPPTHVGM YIGDLNGNGT PDLVHALSPA WGIRIEDNWL
TKPWLVAPWP DGTPRLWGAG YFVNPYR
|
|---|
| |