| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_5109 |
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| Symbol | |
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| ID | 5737067 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009973 |
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| Strand | - |
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| Start bp | 146997 |
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| End bp | 149084 |
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| Gene Length | 2088 bp |
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| Protein Length | 695 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641282274 |
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| Product | Type IV secretory pathway VirB4 protein-like |
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| Protein accession | YP_001547865 |
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| Protein GI | 159901619 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3451] Type IV secretory pathway, VirB4 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTCCCC CGCTCTTGCT CCACTTGCAC GGCCTTGAGG TGGTCAATCT GCACCCGCAC
CAGTGGGAGG TGGCGATTGA TCGGGTGCGC CAAGCCCTGC AAAGTCTGGT GGTGGATTGG
CGGCTGATCA GTGTGGTTGC CCCACGCTCG TTGGCCCAGC GTCGCCAGCG CATCCATGAT
CACTTGCGCC TGCTCGACCC CAGCGACCCG CGCCATCCAC GTCTGACCGC CCAACTCTTG
CATCTGCAGG ATTTGGAACA GCACGCCATG ACCAGCATGA CGCACTACCT CGTGGTCTGG
TGTCCGCCCA GCCTTGCCCA CACCACGGTC GAACACACGC TTGGTCGGGC CTGCGGCGGG
GCGACGCGGC TGACGAGTCT GCCGTTTCTC TTGGGTGCGC CGACGGTGCA GCTGACCGCC
GCGAGCTGTG TGGCGGATAC GCCCACGGGC CAACGCTGCT GGCAGGGCAT GCTGGCCGAA
CGCTGGCATG GGTCACTCTC GCCGTTACTC TTTCGCCCGC TGCTGCTGGA GCAGACCCAT
GCCATCATCG TGGTCGATGC GCTGACCATG GCTCCGGATC GTGCTCGCAC GACCATGGAT
GTGGCCTTAC AACGGCTCGA TGCCCATGCC GCGCTCAATC CGACCTATGA CGAAGCCCGT
CGCCATGCCG TCCAAGACTG GCAAGCGGCC TCGACCCATC TGGAGCGGGG CGCACTCTTG
CATACGGTGC AGGTGGCGGT GTTTGTCGGG GCGGCCTCGC CTGCACTCGC TCGCACCCAC
GCCCAAGCCG CCCGCCAAGC ATTGGGATCG ACGATTAGCT TCAGCCCGAT GCTCGGTCGC
CAACCCGATC TGTTGCCCTT GCTGGGAACC CGCGCGACGG CGACGCTTGA CCTGCCCACC
ACGGGCCATC CGATGATTAC CGCGCAACTG GCGACGCTGC TGCCGATCTA TCTGGCGCAA
CGCTCGCAGC CGCCCGCGTC GGCCTTGTTA GCGGGGGTGG ATGAAGTGCG CGGCACGCCG
TTGCTGCTCG ACTTGACCGC CTTGCCTGCC TTGCATGGCT TTTTCTGTGG GGCGACGGGG
AGCGGCAAGA GTAGCTATGT GGCCACGCTT GGCTCACGCC TGGTCGATGA CGCGGGGTAC
CAGTTGATTC TGCTCGACCC GCAAGGCGCA TTTGCCCCCT TAGCCGCTGC CTATGCAGGC
CGGGCCTCGG TCAATCGGGT GGCCTTAGAT ACGCTGCGCT TGAATCTGCT CGACCCAATT
GTTGACCTCC AGCATGACCT CGTGACCCAA GTGTTGCATG TGGAGGAAGT TCTCCAGTGG
CTCTTGGACG GCGCACTGAC CCAGCTGCAT CGCCAAACGC TGCGGCGGGT CTTGTCGCTG
GTCTATGCGA CCCATGCGGC TCCGCGCTTG TCGGATGTCG TCGCGTTGTT GGCCGAGGAC
ACGACGGGCT TGCGCGAGTT GCTGCTGCCG TGGACGCTGT CGCCGTTTGC CGAGGTCTTT
GACCAGCCCT CAACGATGGA CTTGACGCTG GACCCCACGA CCCCCGTGGT GATCTATGAC
GTATCCGACG CGGCGATGCC TGACCATATT AAGCAGTTCT TCCTGATCTT GATTGCCAGC
GCGATTCAAC GCGAGATTCG GCTGCGTCCG CGCAAGGCGA TTATTGGGAT TGATGAGGCG
GGGGTGCTCT TTGCCAATCC GCTGTTGGCC AGCTTCGCGG AACGCTTGGC CAAGACCGCG
CGGCGTTTCG GTGCAGGCGT GTGGGTGATT GACCAGACGA CCCATTTATT AGACACGAAG
GCCGGAGCGG AGATTTTTGA GAATAGCTTT ATCACGGTGC TTGGCACGAT GCGCAGTGAC
CAGTTGCCTG CCTTGCGTGA GCGGTTCCCG ATGGTGACCG ATGCCCAGTT GCAGTGGATT
ACGGGGTTGG GCATGACCGA CGCGCAGCGG CAGGAACGGG CGGGGCAATA CCTGATCATC
GTCAACGAAA CGCCCTACCT GATCTACAAC CACCTCTCGC ACTGGGAGTG GCAATTGCTC
CCGCAACGGG CAGTGCTGCA TACGGAGGTG GGGTATGGGA CTGTTTGA
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| Protein sequence | MTPPLLLHLH GLEVVNLHPH QWEVAIDRVR QALQSLVVDW RLISVVAPRS LAQRRQRIHD
HLRLLDPSDP RHPRLTAQLL HLQDLEQHAM TSMTHYLVVW CPPSLAHTTV EHTLGRACGG
ATRLTSLPFL LGAPTVQLTA ASCVADTPTG QRCWQGMLAE RWHGSLSPLL FRPLLLEQTH
AIIVVDALTM APDRARTTMD VALQRLDAHA ALNPTYDEAR RHAVQDWQAA STHLERGALL
HTVQVAVFVG AASPALARTH AQAARQALGS TISFSPMLGR QPDLLPLLGT RATATLDLPT
TGHPMITAQL ATLLPIYLAQ RSQPPASALL AGVDEVRGTP LLLDLTALPA LHGFFCGATG
SGKSSYVATL GSRLVDDAGY QLILLDPQGA FAPLAAAYAG RASVNRVALD TLRLNLLDPI
VDLQHDLVTQ VLHVEEVLQW LLDGALTQLH RQTLRRVLSL VYATHAAPRL SDVVALLAED
TTGLRELLLP WTLSPFAEVF DQPSTMDLTL DPTTPVVIYD VSDAAMPDHI KQFFLILIAS
AIQREIRLRP RKAIIGIDEA GVLFANPLLA SFAERLAKTA RRFGAGVWVI DQTTHLLDTK
AGAEIFENSF ITVLGTMRSD QLPALRERFP MVTDAQLQWI TGLGMTDAQR QERAGQYLII
VNETPYLIYN HLSHWEWQLL PQRAVLHTEV GYGTV
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