| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_5100 |
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| Symbol | |
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| ID | 5737058 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009973 |
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| Strand | + |
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| Start bp | 128914 |
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| End bp | 130560 |
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| Gene Length | 1647 bp |
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| Protein Length | 548 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641282265 |
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| Product | alpha beta-propellor repeat-containing integrin |
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| Protein accession | YP_001547856 |
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| Protein GI | 159901610 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.908648 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGATC ATACCCCTCA TCAGAAACCC TTTGTATCGG ATAGCCCGCC CTCCAATCGA
TGGCGTGCAT TCCGCCATTG TGTTGGAATC AGCATGTTGT TTGTACTGAT TCAGGGATCG
GTTCTTGTCT ATACGAGAGG ATCGCTACCG GTAGAACACG CAATCGCGCA ATCAGCCCAA
CACCCGCATG GATCGCCGAA CCTCCTTCCT ACCTATATTA AGGCATCGAA TACCGATCCT
CACGATGCGT TCGGCTTTCG CGTAGCGCTT GATGCTACCA CACTGGCAGT AAGCGCCCCA
TACGAATCAA GTGCCGCAAC GGGTATTCAG GGTGACCAAT CAAATAATAT GGCGCTCCAA
TCAGGAGCCG TGTATATTTT TGTCCGGGAT GGCGATACAT GGGTCCAACA AGCGTATCTC
AAAGCGTCCA ATACCGACGC CGGCGATGGC TTTGGGGTCA GTCTTGCCCT CGATGGGGAT
ACGCTTGTGG TTGGGGCGTA TGCTGAGGAC AGTGCTGCCA CCGGAATCAA CGGCAATCAG
GCCGATAATT CCGCTGCGAA CGCGGGGGCG GCCTATGTCT TTGTCCGATC AGGGTCAACC
TGGAGTCAGC AAGCCTATCT GAAAGCATCC AATACTGATG AAGGCGATGG GTTTGGCTAT
AGGGTTGCGA TTGATGCAAC CACAGTCGTG ATTAGCGCCC GTGGCGAAGA TAGTGGAGCA
ATGGGGGTAA ATAATGATCA GGCGAACAAT GATAAAGTGG ACGCGGGGGC GGCCTATGTT
TTTGTCCGAT CAGGTTCAAC TTGGAGTCAG CAAGCCTATC TCAAAGCATC CAATACCGAT
GCAGACGATG GGTTTGGCTA TAGTGTATCA ATTGAGAACC AGCTGATCGC CGTTGGCGCG
AATGGGGAGG ATGGGAGTAC GACTGGCGTA AATGGAGGGC AGGACGATAA TACTGCTCCG
GACGCAGGGG CGGCCTATGT CTTTGTCCGA TCGGGTTCAA CTTGGAGTCA GCAAGCCTAT
CTCAAAGCAT CCAATACCGA TGCAGACGAT GGGTTTGGAC AGCGTGTTCA GCTTGCAGGA
TCAACGGTAG TGGTGAGTGC CGTTCGGGAA GATAGCGCCG CCACCGGAGT CAATGGCAAT
CAGCATGATA ATACTGCCAT GGATGCAGGA GCGGCTTATG TCTTTGTTCA GAATGGGAAT
ACGTGGAGTC AACAAGCCTA TCTAAAGGCC TCAAATACTA ACGCAGGCGA TGGGTTTGGC
TATAATCTCC ATGCGTTGGG TGATTGGATA CTGATTGGCG CACCATATGA GGCGAGTGCG
GCCACAATCA TCAACGGGAA TCAGCATGAT AATAATGCCA ACCGTGCAGG AGCCGCCTAT
CTTTTTGCGC GGCAACAGAC ACTATGGAGT CAGTCCGCCT ATCTGAAAGC CATGAATACC
GATTCAGGCG ATCTCTTTGG GAATACTATG GGCATGAATG AGTCACTCAT CATCGTTGGA
GCGTCAAATG AAGATAGCAA TACCCTCGGG ATCAATGGCG ATCATGCGAA TAATCTAGCC
CTTAATTCAG GCGCAGTCTA TAGTTTCCCA TTTGCCATGA TTCCTTCCAT ACGGGCGTAT
CTCCCATTGA CCACCCGGGG TGAATAG
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| Protein sequence | MDDHTPHQKP FVSDSPPSNR WRAFRHCVGI SMLFVLIQGS VLVYTRGSLP VEHAIAQSAQ
HPHGSPNLLP TYIKASNTDP HDAFGFRVAL DATTLAVSAP YESSAATGIQ GDQSNNMALQ
SGAVYIFVRD GDTWVQQAYL KASNTDAGDG FGVSLALDGD TLVVGAYAED SAATGINGNQ
ADNSAANAGA AYVFVRSGST WSQQAYLKAS NTDEGDGFGY RVAIDATTVV ISARGEDSGA
MGVNNDQANN DKVDAGAAYV FVRSGSTWSQ QAYLKASNTD ADDGFGYSVS IENQLIAVGA
NGEDGSTTGV NGGQDDNTAP DAGAAYVFVR SGSTWSQQAY LKASNTDADD GFGQRVQLAG
STVVVSAVRE DSAATGVNGN QHDNTAMDAG AAYVFVQNGN TWSQQAYLKA SNTNAGDGFG
YNLHALGDWI LIGAPYEASA ATIINGNQHD NNANRAGAAY LFARQQTLWS QSAYLKAMNT
DSGDLFGNTM GMNESLIIVG ASNEDSNTLG INGDHANNLA LNSGAVYSFP FAMIPSIRAY
LPLTTRGE
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