Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_5012 |
Symbol | |
ID | 5736971 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009973 |
Strand | + |
Start bp | 20867 |
End bp | 21736 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641282179 |
Product | MerR family transcriptional regulator |
Protein accession | YP_001547770 |
Protein GI | 159901524 |
COG category | [K] Transcription |
COG ID | [COG0789] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.147011 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTACGAA TTGGCGCATT CTCGCGCATC GCGCACATGA CCATCGATAC CTTACGTCAC TATGACGCAG TCGGATTACT CAAGCCTGCG GTGATCGACC CCACCACGGG CTATCGCTAC TACACGGCAG ACCAATTGCA GGCAGTCAAT CAGATTGTGA CATTAAAGGA GCTGGGCTTT TCGTTAGAGG AAATTGCCCA CATCCAGAAA GGACATTCGA GCAGCGCTGA CCTTCACGCC CTATTACAGC ACCAACTCAG AGTGACGGAA CAGACAATTA CGGCAGCCGA ACAGCGCCGT TCCCGGATTC AGGCGCATCT CCATGCGGTT GAAGCCCAGC AACGCCTACC GCCCTATGCG ATTCAGCTGA AATCGATGGA CTCGACGATG GTTGCAACGA TGCGAGCCAC GGTTCCCACG ATGGCGCAGA TTCCTGAATA TTGGCAGGTG TGGTTTCAGA CGGTTGCTGC GTGGCTCCAC ACACAGCAGA TCCCAATTGG GGTTCCGATT GCCTTCCATC ACGATGAGGG GTTTCAGCCC GAACAGATCG ATACCGAATG TGGATTCATC ATTCCAACCA TCCACCGCCG AGCGATAGCA CCGCCTACCC CAATCGTTCT GCGACAACTT GAAGCACATG CACATATCGC CACGGTGGCG GTTGCCAATC CCGATCCCCA TACAGGAGGA TTAAAGAATG CCTATGCCGC CCTTGGGCAG TGGATCAGCA CACAGGGCTA TACGCTCTAC GGTGCTCCAC GCGAAGTGTA TTATGGCGCA CCCGAAACAG GCGATGTAAC CGTCGAAATC CAATTTCCGG TTGAACAATC GCAAGGAATC CAGCCCGCTG TGTCCCGGTC GGAGCCGTGA
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Protein sequence | MLRIGAFSRI AHMTIDTLRH YDAVGLLKPA VIDPTTGYRY YTADQLQAVN QIVTLKELGF SLEEIAHIQK GHSSSADLHA LLQHQLRVTE QTITAAEQRR SRIQAHLHAV EAQQRLPPYA IQLKSMDSTM VATMRATVPT MAQIPEYWQV WFQTVAAWLH TQQIPIGVPI AFHHDEGFQP EQIDTECGFI IPTIHRRAIA PPTPIVLRQL EAHAHIATVA VANPDPHTGG LKNAYAALGQ WISTQGYTLY GAPREVYYGA PETGDVTVEI QFPVEQSQGI QPAVSRSEP
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