Gene Haur_5012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_5012 
Symbol 
ID5736971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009973 
Strand
Start bp20867 
End bp21736 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content55% 
IMG OID641282179 
ProductMerR family transcriptional regulator 
Protein accessionYP_001547770 
Protein GI159901524 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.147011 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTACGAA TTGGCGCATT CTCGCGCATC GCGCACATGA CCATCGATAC CTTACGTCAC 
TATGACGCAG TCGGATTACT CAAGCCTGCG GTGATCGACC CCACCACGGG CTATCGCTAC
TACACGGCAG ACCAATTGCA GGCAGTCAAT CAGATTGTGA CATTAAAGGA GCTGGGCTTT
TCGTTAGAGG AAATTGCCCA CATCCAGAAA GGACATTCGA GCAGCGCTGA CCTTCACGCC
CTATTACAGC ACCAACTCAG AGTGACGGAA CAGACAATTA CGGCAGCCGA ACAGCGCCGT
TCCCGGATTC AGGCGCATCT CCATGCGGTT GAAGCCCAGC AACGCCTACC GCCCTATGCG
ATTCAGCTGA AATCGATGGA CTCGACGATG GTTGCAACGA TGCGAGCCAC GGTTCCCACG
ATGGCGCAGA TTCCTGAATA TTGGCAGGTG TGGTTTCAGA CGGTTGCTGC GTGGCTCCAC
ACACAGCAGA TCCCAATTGG GGTTCCGATT GCCTTCCATC ACGATGAGGG GTTTCAGCCC
GAACAGATCG ATACCGAATG TGGATTCATC ATTCCAACCA TCCACCGCCG AGCGATAGCA
CCGCCTACCC CAATCGTTCT GCGACAACTT GAAGCACATG CACATATCGC CACGGTGGCG
GTTGCCAATC CCGATCCCCA TACAGGAGGA TTAAAGAATG CCTATGCCGC CCTTGGGCAG
TGGATCAGCA CACAGGGCTA TACGCTCTAC GGTGCTCCAC GCGAAGTGTA TTATGGCGCA
CCCGAAACAG GCGATGTAAC CGTCGAAATC CAATTTCCGG TTGAACAATC GCAAGGAATC
CAGCCCGCTG TGTCCCGGTC GGAGCCGTGA
 
Protein sequence
MLRIGAFSRI AHMTIDTLRH YDAVGLLKPA VIDPTTGYRY YTADQLQAVN QIVTLKELGF 
SLEEIAHIQK GHSSSADLHA LLQHQLRVTE QTITAAEQRR SRIQAHLHAV EAQQRLPPYA
IQLKSMDSTM VATMRATVPT MAQIPEYWQV WFQTVAAWLH TQQIPIGVPI AFHHDEGFQP
EQIDTECGFI IPTIHRRAIA PPTPIVLRQL EAHAHIATVA VANPDPHTGG LKNAYAALGQ
WISTQGYTLY GAPREVYYGA PETGDVTVEI QFPVEQSQGI QPAVSRSEP