Gene Haur_4949 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_4949 
Symbol 
ID5736785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand+ 
Start bp6276438 
End bp6277535 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content52% 
IMG OID641282116 
Productpeptidase M20 
Protein accessionYP_001547707 
Protein GI159901460 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCAATCC GTACAAGTTT GGTTGATCTG ACCACGCGCT TGGTGGCGAT TCCCAGTGTT 
TCCGCCGAAA AACGCGATTT GCAGCCAGTG ATCGATCTGG TGGTGGCTGA ATTAGCCGAT 
TATCCAGCGG CGTTGTTGCA TCATCGCGAT GCTAATGGCT ACCCAATGTT GGTGGTCAAT 
TTCAACCAAG AACTGCGCAG CGATCTTATT TTGAATGCCC ATTTGGATGT TGTGCCAGCC 
CGCCCTGAGC AATGGCACGC CTTCGAGCAT GATGGCAAAT TGTATGGTCG TGGCACGCAA 
GATATGAAGG GATCGGCGGC GGTCTACATT GAAATTATTA AAGAAATTGC CCAATTGCCT 
GCTGAGCAAC GCCCTAACGT AAGCTTTCAA TTTGTGACCG ATGAGGAAAT TGGCGGAGCA 
AATGGCACAG CCTTATTGCG TGATGAAGGC TGGCAGGCTA ATTTATTTAT TGCTGGCGAG 
CCGACCAACC TGAATATTTG TCATGGAGCC AAGGGCATTT TATGGCTGGC AGTTGAGCAA 
CCAGGCGTGC CAGCCCATGG TTCGCGGCCT TGGGAAGGCG TGAATCCGAT TGAGCGTTTG 
GCAAGTGGCC TTGGGCGTTT GTACGAATAT TATCCAACGC CTGCGCAAGA AATTTGGCGC 
ACTACGGTTA CGCCTTCGAT TATCAAAGGC GGCGATGCTG GCAATCGGAT TCCAGCCAAT 
GCCCAACTGA ATCTTGATAT TCGCTGGACA CCCGAAGAAG GTGCTGATGC GGTGATTGAT 
AACGTGAAGC AAGCCTTTGC AACGAGCAGC GAACCCAATC CCAATGTGCA GATTTTGCAT 
CGTGGCACGG CCCTAAATAC GCCAGCCGAG GAGCCAAACT TACAACGCAT TGTTGATGCA 
CAACAATCCA GCCTTGGTCG CCAAGCCCAA CTCTTCCGCG AGCATTTTGG CTCCGATGCC 
CGCTTCTACA GCGATGCCGG AATTCCAGCG GTCTGTTGGG GGCCAGAAGG TGCAGGCTTG 
CATACCGACG ACGAGTGGGT CAGCATCGAT GGCTTGGTCG ATTATTATCA GGCGGTCAAA 
ACCTTGTTGG GTATGTAG
 
Protein sequence
MSIRTSLVDL TTRLVAIPSV SAEKRDLQPV IDLVVAELAD YPAALLHHRD ANGYPMLVVN 
FNQELRSDLI LNAHLDVVPA RPEQWHAFEH DGKLYGRGTQ DMKGSAAVYI EIIKEIAQLP 
AEQRPNVSFQ FVTDEEIGGA NGTALLRDEG WQANLFIAGE PTNLNICHGA KGILWLAVEQ 
PGVPAHGSRP WEGVNPIERL ASGLGRLYEY YPTPAQEIWR TTVTPSIIKG GDAGNRIPAN 
AQLNLDIRWT PEEGADAVID NVKQAFATSS EPNPNVQILH RGTALNTPAE EPNLQRIVDA 
QQSSLGRQAQ LFREHFGSDA RFYSDAGIPA VCWGPEGAGL HTDDEWVSID GLVDYYQAVK 
TLLGM