Gene Haur_4899 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_4899 
Symbol 
ID5736735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand- 
Start bp6236122 
End bp6236862 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content50% 
IMG OID641282066 
ProductTPR repeat-containing protein 
Protein accessionYP_001547657 
Protein GI159901410 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACCTA CAACGATTGT TAGCACGGGC TTGCTGTTAT TAGCCCTGAC TGGTTGCGGC 
GCACCGTCTG CCGCCGATAT TAATGCTGAG GGCAACGCAC TCTACGAGCA AGGTGTATAT 
GGCCAAGCGC TCAATCAATA TAAAGAAGCG GTCTTGATGG CTCCTGATCG GCCTGAACCA 
CAGGTGAATT TGGGCAATAC GCGCTATCAA ATGGGCGATT ATTTAGGGGC AATCGAAGCC 
CCAAATAATG CCTTGCAAAC TGCCGATGCT GCCACTCAAG CGATTATTTA TTACAACCAA 
GGTAATGCCC ATTTTCGGCT AGAGGAGCTT GATGAGGCGA TTGAAGCCTA TAAAAAAGCC 
TTACGAATTA ATCCCGATGA CCTTGATGCC AAATATAACC TTGAGCTAGC CCAAAAAATC 
CAAGAGCAAC AGCAACAACA GCAACAAGCT AGCAATCAAC AAGATCCCAA TCAGCAGCCA 
CAGGATGGCC AACAAGATCC CAATCAGCAG CCACAAGATG GCCAACAGCC TGAGCCAAAC 
CAAGATCCAA GTGGCGGAGG CCAACCACCG GAACGCCCGC AAGCACCACC ATCAAGTATG 
AACCCTGATG AAGCTGAGCG CCAACTTGAT CAATTGGAGC GTAGCGAGGA GCGCAATCGC 
GAAGATCTGT ATGATAATTA CGCGGTTGGA GCCGATGGCA ACCCGACCGA TAGCCAAAGC 
GGCGATGACG AAGGTTGGTA G
 
Protein sequence
MKPTTIVSTG LLLLALTGCG APSAADINAE GNALYEQGVY GQALNQYKEA VLMAPDRPEP 
QVNLGNTRYQ MGDYLGAIEA PNNALQTADA ATQAIIYYNQ GNAHFRLEEL DEAIEAYKKA 
LRINPDDLDA KYNLELAQKI QEQQQQQQQA SNQQDPNQQP QDGQQDPNQQ PQDGQQPEPN 
QDPSGGGQPP ERPQAPPSSM NPDEAERQLD QLERSEERNR EDLYDNYAVG ADGNPTDSQS 
GDDEGW