Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_4864 |
Symbol | |
ID | 5736710 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 6197852 |
End bp | 6198406 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641282030 |
Product | phage shock protein C, PspC |
Protein accession | YP_001547622 |
Protein GI | 159901375 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG1983] Putative stress-responsive transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0646459 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACCAC GGTTATTGCG CTCCTACTAC GACCGCAAAC TTGCTGGCGT ATGTGGAGGC TTAGGTGCTT ATTTTGAAAT TGATTCAACG CTGGTGCGTT TAGTCATGAT TTTACTGGTC TTTACGGGCT TAACGTTTTT GATTTATCCT GTATTGTGGT TGATTATGCC GAGCGAAAAA CCTGGGGCGA TGCCACCGCC CTTTATGCCG CAGCAACAAG CGGGGGTTGT GCCACCACCA CAGCAACCAT TCAACAATGT TAGCTCGCCC TATCGCTATG ATCCATTTAC CGGCCAGCCA ATCGCTGAGC AACCAGAAGC CTATACTGGC ACAACCGTTC AAGTAAGGCC TGATCAATAT ATTCCGCCCT ATTCGCAGGC TCAGCAACCA GCCCATGCGC CACGCTCAAC CCGCAACAAC AAGAAAGTGC TAGGGTTGTT GCTGCTGGCA TTTGGCTTGA TCACCTTTAT CGATAAATTT GGTGGGGCAG CAGAATTTAT TACGCCATTG TTGTTGATTG GCTTAGGGAT CATGTTGTTT CGGCGGCGTG GCTAG
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Protein sequence | MQPRLLRSYY DRKLAGVCGG LGAYFEIDST LVRLVMILLV FTGLTFLIYP VLWLIMPSEK PGAMPPPFMP QQQAGVVPPP QQPFNNVSSP YRYDPFTGQP IAEQPEAYTG TTVQVRPDQY IPPYSQAQQP AHAPRSTRNN KKVLGLLLLA FGLITFIDKF GGAAEFITPL LLIGLGIMLF RRRG
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