Gene Haur_4670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_4670 
Symbol 
ID5736517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp5966999 
End bp5967430 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content48% 
IMG OID641281834 
Productphage shock protein C, PspC 
Protein accessionYP_001547429 
Protein GI159901182 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1983] Putative stress-responsive transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAATT CAAATCGCTT AGTGCGTGTT CAACAAGATC AAATGATTGC TGGTGTGTGT 
ACGGGCTTGG CTCAATATTT CGCTTTTGAT GTAACCTTGG TGCGCTTGGC CTTTGTGCTA
GTGACCTTGG CTGGTGGTTC GGGCGTGTTG CTCTACATCA TTTTGTGGGC CGTGTTGCCA
GTGGTAACCG CACCTGGCTT GCCAAGCCCA GGCATCAACA GCGGGATTGA TGAAATGCGT
AACCAAGCCC AAAATGTGTT CAACAAGGTC AAAACTGCGG TTAACAATGC TCAAACCAGC
AACGCTAACT CGGCTGCACC ACAAAGCAAT TGGAAGTTTG ATCCACAAAC GGGTCAACCA
ATCAATCCAG CTCCAGCCCA ACCAGAAAAA CCACGGTTTG ATCCATACAC TGGTCAGCCA
TTGAACGACT AA
 
Protein sequence
MQNSNRLVRV QQDQMIAGVC TGLAQYFAFD VTLVRLAFVL VTLAGGSGVL LYIILWAVLP 
VVTAPGLPSP GINSGIDEMR NQAQNVFNKV KTAVNNAQTS NANSAAPQSN WKFDPQTGQP
INPAPAQPEK PRFDPYTGQP LND