Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_4670 |
Symbol | |
ID | 5736517 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 5966999 |
End bp | 5967430 |
Gene Length | 432 bp |
Protein Length | 143 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641281834 |
Product | phage shock protein C, PspC |
Protein accession | YP_001547429 |
Protein GI | 159901182 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG1983] Putative stress-responsive transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAAATT CAAATCGCTT AGTGCGTGTT CAACAAGATC AAATGATTGC TGGTGTGTGT ACGGGCTTGG CTCAATATTT CGCTTTTGAT GTAACCTTGG TGCGCTTGGC CTTTGTGCTA GTGACCTTGG CTGGTGGTTC GGGCGTGTTG CTCTACATCA TTTTGTGGGC CGTGTTGCCA GTGGTAACCG CACCTGGCTT GCCAAGCCCA GGCATCAACA GCGGGATTGA TGAAATGCGT AACCAAGCCC AAAATGTGTT CAACAAGGTC AAAACTGCGG TTAACAATGC TCAAACCAGC AACGCTAACT CGGCTGCACC ACAAAGCAAT TGGAAGTTTG ATCCACAAAC GGGTCAACCA ATCAATCCAG CTCCAGCCCA ACCAGAAAAA CCACGGTTTG ATCCATACAC TGGTCAGCCA TTGAACGACT AA
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Protein sequence | MQNSNRLVRV QQDQMIAGVC TGLAQYFAFD VTLVRLAFVL VTLAGGSGVL LYIILWAVLP VVTAPGLPSP GINSGIDEMR NQAQNVFNKV KTAVNNAQTS NANSAAPQSN WKFDPQTGQP INPAPAQPEK PRFDPYTGQP LND
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