Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_4639 |
Symbol | |
ID | 5736486 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | - |
Start bp | 5927698 |
End bp | 5928357 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641281803 |
Product | translation initiation factor IF-3 |
Protein accession | YP_001547398 |
Protein GI | 159901151 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0290] Translation initiation factor 3 (IF-3) |
TIGRFAM ID | [TIGR00168] translation initiation factor IF-3 |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000486529 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTGTTTTG ATGTCCTTTT TTGGAAGGAG CCTCCTATCA GAGACAAGCT ACGAATCAAT AATCGGATTC GCGTGCGTGA AGTGCGTCTG ATCGACGAAA ACGGGAACCA AGTTGGGATC ATCACGACCC GTGATGCACT CGACATGGCA CATGACCGCG ATCTCGACTT AGTTGAGGTT GCCCCGAATG CTAGCCCGCC GGTTTGCCGC CTTATGGATT ACGGCAAGTA CCGCTACGAG CAAACCAAGA AAGAACGCGA AGCCCGCAAG AATCAAAAAC AGGTCGAACT GAAAGAGATT CGCATGCAGC CGCGCACCGA CACCCATGAC TTGCAGGTAA AGGTGAACAA TGCTCGCCGT TTCCTCGAAG AAGGGCATAA AGTGAAGTTC TCGGTACGTT TCCGTGGGCG TGAAATCACT CACCCTGAAA TTGGCCGCGA AATGCTCGAG CAAATTGCCG AGGATTTACG CGATCATGGG GTGCTTGAGC AAAAACCCAC GCTCGAAGGT CGGGCCTATT CGTTGATCAT GGCCCCATCA CCAAGCAAAA CGCAGCCTGC GAAACGTAGC GATAAACCGG CTCCACCATT ATCATCATTA GGAGATATTG ATTTCGATGC CGAAGATGAA GACCAACAAG CAGGCCAAGC GCCGCTTTAA
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Protein sequence | MCFDVLFWKE PPIRDKLRIN NRIRVREVRL IDENGNQVGI ITTRDALDMA HDRDLDLVEV APNASPPVCR LMDYGKYRYE QTKKEREARK NQKQVELKEI RMQPRTDTHD LQVKVNNARR FLEEGHKVKF SVRFRGREIT HPEIGREMLE QIAEDLRDHG VLEQKPTLEG RAYSLIMAPS PSKTQPAKRS DKPAPPLSSL GDIDFDAEDE DQQAGQAPL
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