Gene Haur_4578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_4578 
Symbol 
ID5736423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp5858040 
End bp5858852 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content50% 
IMG OID641281740 
Productputative ABC transporter, permease component 
Protein accessionYP_001547337 
Protein GI159901090 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3559] Putative exporter of polyketide antibiotics 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000593867 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGCGTA ATATTTTTAC CAAAATCATG TACGAACGCC GCCGCTCGCT TGTGTGGTGG 
GGGCTAGGAA TTATTCTGCT GATCGCCATG CTGATGGGGT TTTATCCAGC GATGCGTAAC
CCCGCCACCA GCGAACAGCT TACCAAAGCC ATGGAAGCTA TGCCTAAAGA GATGTTGGCA
GCCTTCGGCG TAACCGATGT CGCCAATTTG ATCACGCCAG CCGGCTATAT TCAAGGGCGT
TTGTTTGGCT TTATGCTGCC GCTGATCGTT ATGATTTTTA CGATTGGGCT TGGCTCACGG
GCGATTGCTG GCGAGGAAGA AGCTCGCACG CTTGATTTAA TTCTGGCCCA CCCAATTCGC
CGTTCAACGA TTGTGTGGCA AAGTTTTGCC GCGCTGAGTG TGCTTGCGAT TGCCATGGGC
TTGATTACAT GGCTCAGCCT GTGGATTGGC GCAGTCTTGC TGGATATGGA GATTGGCGTT
GCTGAGCTAG GTGCTGCATC GTTTAATATG AGTTTGATGG CGCTGTGTTT TGGGTCAATC
GCCTTATTAA TCGGGGCTGC CACAGGCAAA CGCGCCATGA GCATGGCCGT TGCAACAATT
TTGGCAGTAA TTGGCTACTT TGCCAATTCG CTAGCCAGCG TGATCGATTG GCTTGAGCCA
TTTCAAAAAC TCTCGCCATT CTATTACGCC GATTACAACC AACCATTGAA ACATGGCTTC
CATTATTTGC CAATTTTGGT CTTGGGTGGA GTGATCGTAC TGTGTGGGTT TGCTGCGGTC
AAGCTATTTG AACGCCGTGA TGTGGCGGTG TAG
 
Protein sequence
MLRNIFTKIM YERRRSLVWW GLGIILLIAM LMGFYPAMRN PATSEQLTKA MEAMPKEMLA 
AFGVTDVANL ITPAGYIQGR LFGFMLPLIV MIFTIGLGSR AIAGEEEART LDLILAHPIR
RSTIVWQSFA ALSVLAIAMG LITWLSLWIG AVLLDMEIGV AELGAASFNM SLMALCFGSI
ALLIGAATGK RAMSMAVATI LAVIGYFANS LASVIDWLEP FQKLSPFYYA DYNQPLKHGF
HYLPILVLGG VIVLCGFAAV KLFERRDVAV