| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_4468 |
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| Symbol | |
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| ID | 5736319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 5714360 |
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| End bp | 5715181 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641281631 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_001547228 |
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| Protein GI | 159900981 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.334714 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCCCAAA TAGCTGCGCT TGGTATCATT GGCGATCCAG TCGCCCATAG TCTTTCGCCT
GCAATGCACA ATGCTGCTTT GCAGGCGCTT GGCATTAATC AGCAGTATGA TCGCTGGCAT
ACTCCCGCCG CTGATCTGCC AGCCCGCGTT CAAAGTTTAC GCTCCAAGGG TATGTTGGGA
GCCAATGTAA CCTTGCCGCA TAAAGTGGCG ATTGCTGGTT TGCTTGATCG CACGGTGGCA
ATCGCCCAAG AACTTGGTGC GGTTAACACG GTTGTGCGTG AAGCTGATGG AAGTTTGACT
GGCCACAACA CCGATGCTCC TGCTCTGCAA GCCTCACTGC AAGCCTACGG AGCAGATTTA
GCCAAGCAAC GGGCAGTGAT TCTCGGCGCA GGTGGGGCGG CTCGGGCGGC ACTTTGGGCT
TTACGCAATG CAGGTTGCCA ACAGATTAGC CTGATCAACC GCACGCTCAG CAGTGCTCAA
GCCTTAGTTT TGCCACATGA ATTGGCCTTA GCCGCTGATG ATCCGCGAGT GGCCGCACAC
CTTGCCGCTG CAACCTTGTT GATCAACGTC ACGTCGTTGG GCTGGAAAGA TACTGATCCT
GCGCCGCTGG ATTTGGCTCT GTTGCATGCA GGCTTGATGG TATACGATAC GGTTTATCGC
CGAACGCCAT TGCTGCGAGC GGCGGCGGCT TGTGGGGCGG CCCACTACGA TGGCCTTGAT
ATGTTGGTGC GTCAGGCCGG TTTGGCGTTT AGTTTGTGGT TTAAGCAGCC TGCACCGCTT
GAAATAATGC GAGCAGCAGC CCTAGCGGCT CTACAAGGAT AA
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| Protein sequence | MSQIAALGII GDPVAHSLSP AMHNAALQAL GINQQYDRWH TPAADLPARV QSLRSKGMLG
ANVTLPHKVA IAGLLDRTVA IAQELGAVNT VVREADGSLT GHNTDAPALQ ASLQAYGADL
AKQRAVILGA GGAARAALWA LRNAGCQQIS LINRTLSSAQ ALVLPHELAL AADDPRVAAH
LAAATLLINV TSLGWKDTDP APLDLALLHA GLMVYDTVYR RTPLLRAAAA CGAAHYDGLD
MLVRQAGLAF SLWFKQPAPL EIMRAAALAA LQG
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