Gene Haur_4432 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_4432 
Symbol 
ID5736283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand+ 
Start bp5672240 
End bp5672875 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content49% 
IMG OID641281595 
Productpeptide deformylase 
Protein accessionYP_001547192 
Protein GI159900945 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0242] N-formylmethionyl-tRNA deformylase 
TIGRFAM ID[TIGR00079] peptide deformylase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGTAC GTCGGGTATT GCAAATAGAA GATCCAACTG ATGCAGTGGT ATTACGGGCC 
AAGGCCAAAC GCATCACCAG TTTTGATCAA AGTTTGGCTG GTTTAGTTGA TGATATGATT 
GAAACCATGC GCGAAGCTCG GGGTGTTGGC ATTGCCGCGC CGCAAGTTGG GGTTTCACGG 
CGCGTAGTGG TGATTGAAGA GCCAGCCCAA TACGAAGAAC ATGAAGATGG TACGCAGACC 
CAAATTGCTC CCGCCGTGCT GTATGTGATG GTCAACCCAG AGATTATCAA AGCCAGCGAA 
GAAACCCATA TGCTGCAAGA AGGCTGTTTG AGCCTGCCTG GCCGCTATAC CAAAGTGCCG 
CGCAATAAAT GGGTAACGAT CAAATATTAC GATTTGAAGG GTCGCGAACA GCGCTTGCGC 
CATATTCCTG CTGAAGATTA CAAAGTTGGG CACATTGCTC AGCACGAGTT GGATCACCTT 
GATGGGATTA TGTTTACCGA CCGCATGACC GAAGAAAGCA AATTGGTCGA TTATCGCAAA 
GAAAGTGAAA GCGCACGCCT CAAACGGCGC GGTTTGTTGG CGCGTAAAAA ACGCCCCGAT 
GCTGAACTCG AATCAGAATC GACAACCAAT GAATAA
 
Protein sequence
MAVRRVLQIE DPTDAVVLRA KAKRITSFDQ SLAGLVDDMI ETMREARGVG IAAPQVGVSR 
RVVVIEEPAQ YEEHEDGTQT QIAPAVLYVM VNPEIIKASE ETHMLQEGCL SLPGRYTKVP 
RNKWVTIKYY DLKGREQRLR HIPAEDYKVG HIAQHELDHL DGIMFTDRMT EESKLVDYRK 
ESESARLKRR GLLARKKRPD AELESESTTN E