| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_4381 |
|---|
| Symbol | |
|---|
| ID | 5736231 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | - |
|---|
| Start bp | 5597266 |
|---|
| End bp | 5598006 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641281543 |
|---|
| Product | LamB/YcsF family protein |
|---|
| Protein accession | YP_001547141 |
|---|
| Protein GI | 159900894 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1540] Uncharacterized proteins, homologs of lactam utilization protein B |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.284094 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCATCG ATCTCAATGC CGATTTGGGC GAAGGCAGCG ATTTTGATGC TGAATTAATG
TCGCTGCTTT CGTCGTGCAA TATTGCTTGT GGCGGCCATG CTGGCGATCA AGCAAGCATG
CGAACGGCCT TGCAATTGGC TCAGCAACAC AACCTTTGTG TCGGCGCACA CCCCAGCTAC
CCTGATCGGG CGCATTTTGG GCGGGTGGTG CTTGAACTTG AGCCAAGCCA ATTGCAAGCT
AGCTTAACCG CGCAGATTAC ACAGTTACAA CGTTTGGCGA CTGAGCAAGG GACTAAGGTA
CACTATGTTA AACCCCATGG CGCTTTATAT AATCAGGCTG CGATTGATTC TGATTTAGCG
CAACTGCTGA TTACAACAAT CCAAACCATC GATCCAAGCC TTGCGCTGAT GGGGTTGGCG
GGTAGCTCGT TGCTCGAACA AGCGGCAACG GCGGGCTTGC AAACAATCGC CGAAGGCTTT
ATCGACCGAG CTTACGAAAT TGATGGTTGC TTGCGGTCGC GCAGCTTGGC TGGAGCTGTG
CATCATGAAC CGAATGTGGC ACTCCAACAG GCTTTAGCGC TTGCCAAAGG CATGCCATTT
CCAAGTTATA CTAAGCTACC AATTAGGTTA ACCGTGCAAA GTTTGTGTTT GCATAGCGAT
ACCCCGCAAG CACTGGCTTT TGCCCAAGCC GTTCGTACTG CGCTAGTAGC TGAAGCTATT
ACGATTCAAG CGGCCTGCTG A
|
|---|
| Protein sequence | MIIDLNADLG EGSDFDAELM SLLSSCNIAC GGHAGDQASM RTALQLAQQH NLCVGAHPSY
PDRAHFGRVV LELEPSQLQA SLTAQITQLQ RLATEQGTKV HYVKPHGALY NQAAIDSDLA
QLLITTIQTI DPSLALMGLA GSSLLEQAAT AGLQTIAEGF IDRAYEIDGC LRSRSLAGAV
HHEPNVALQQ ALALAKGMPF PSYTKLPIRL TVQSLCLHSD TPQALAFAQA VRTALVAEAI
TIQAAC
|
|---|
| |