| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_4276 |
|---|
| Symbol | |
|---|
| ID | 5736135 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | + |
|---|
| Start bp | 5458769 |
|---|
| End bp | 5460976 |
|---|
| Gene Length | 2208 bp |
|---|
| Protein Length | 735 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641281436 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001547036 |
|---|
| Protein GI | 159900789 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00531849 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCGAT TTAAACGATT TCTACCATTG GCGCTAATTG CCTTGAGCGC CATTATTTTT
CTCATTCCGC CTGCGCGGCC TAGCATCGAT GTTGTGATGG GCAGCGAAGG CGAATTTCTG
GTTGAAGGCC AAACTCAAAA CTTCCGAAAT TTTTATGGAT TTAAGGAAGT TGAGCGGACA
GAGCAAGGTG TATTTCGCTG GACAAGCGGA CGTGGCAGCA TTGCGTTTCC TTATTGGGAG
AATGTTGCCG CCCCCTTACA GCTTAATCTA TTGCTCTGTG GCTGTCGCAC CGATGGTCAA
ACCATGCCCT TAACAGTTAC GGTCAATCAG CAAGCGTTGC TCAAACTTAA TCTGAGCAAT
CAATGGCAAT GGTATCATGT GCAACTTCCC GCTGGTTTAA CCCACCCTGA TCATGATATT
TTGCTTGACT TGACCTCGGC AGAATGGCGT AGCCCTGATC AACGTACCTT GGGCATTGTG
GTGCAACGCA TCCAAATTGA GGCGTTGGCA GCCCAACCAA CCCAATCGTT CGTCGCCTGG
CTAGGCTTGG CACTTGGCTT AGGGTTAATG GTGTTGTGGC AGATTCCAGT GGGCTTTGCA
GGAATTGTGT TTGGGCAGTG GCTGCTTGGG GTTTATGGCT ACCAGCCCCA GTTTTTGCCA
AAGGATTTTC TTCTGATCAG TTTGGTTTTT GCCAACGTGA TTGGTTGGCA ATGCATGCGC
AATCTGCCGC AGCTATGGCG CTGGGTAAGC TTGCCACTCA GTAGCTTTTG GCTGATTAGC
AGCCCTCAAA TCCTTGGCTC GTGGATTTTA GATGATGCGT TTATCTCATT TCGCTATGCT
GCCAATTTGG CCAATGGTCA GGGGTTGGTG TTCAACCTTG ACGAGCGGGT CGAAGGCTTT
ACCAATTTCC TTTGGACCTT ATTAAGTAGC TTCAGCATTA AACTTGGGGC CGACCCAATT
TTAGTCACCC ATGCAACCAA CCTGCTTTTG GGCATGGTGA TTGTGGTCTT AAGTTTACAA
TTGGCCCATC GCTTGCATCA AAGTAGCTGG ATGACCCTAG CGATACCCTT GATGTTGCTC
AATTTGCCGT TATTGCTCTA CACAAGTTTG GGTAGCGGCA TGGAAACCGC ACTCTTTTGC
GCGGGTATTT TGGCAACCGT GCTACTTGCG ATCAATCAGG TCTGGGGTTA TGCAGCGATC
GCCACCACGC TCACGATTAT GACTCGGCCT GATGGCATGC TGTTGGCTGG GATTATTGGC
TTACTGGCAA TTTGGCAAAG TTGGCAAACC AAGCACTGGC AGCCGCTAAT ACGCTACGCC
GGAATCTTGA GCCTGACCTT TGTACCCTAC TGGCTGGCGC GTTGGTGGTA TTATGGCTAT
CCACTGCCCA ACACGTTTTA TGCCAAAGTT GGTGGCACAG CCAAACAAGC CGAACGAGGG
ATTAATTATT TTATTGATTT TAACCGTAGC TACTACTTAG GTTGGCTTGG TTTAGGGCTG
GGAGCACTAG CAAGTGGGCT GCGTTGGTAT CAAACTAAAA AAGTACCCAT CCTTGCCATC
ATCACATGGG CAATCGTTGG CCTCTACACC AGCTACACGA TTAGCGTGGG CGGCGATTGG
ATGCCAGGTT ATCGTTTTAT GGTCGCAACT GTGCCATGGT TTGCGCTTTT GGCAAGCTGG
GGCATCAGCG AACTTTGGCA CTATCGGCGT TGGCTGGGCG CTAGTGCAAT CGTAGCCAGC
AGCGCAATCC TGTTGCTCCT GCTCCAGCCA CTTCAGCAAG AACGCCCATT AACAGTTGGT
TCGGCGGCTT GGTACGAGAC CGATGTGGTC AATCGCTATC GTGAAGTTGG GCTATGGATC
AAAGCCAGCA CACCGCCCGA AACCACGCTA ACGGTTACCG CTGCCGGAGC CATACCCTAT
TATGCAGAAC GCACAACGAT TGATGCTCAT GGCTTGACCG ATCTGCATAT TGCGCATCTG
CCAATTGATC CGAGCAAGGC GGGCAAACCT GGCCACGAAA AGCAAGACCC CGATTATGTG
CTCCGTGATC GAAAACCAAG CTTAATTCCA TGGGTTGCTG CACCAATGTT TACTAGCCAT
CCATTATTTG ATGCTAACTA TCGGCTGATC GAAGCCAGCG GCGTTGAAGG CCGAGGCATT
CGGATGTTTG TCCGCCGTGA TAGTGGCCTA TTTGAGCAAG CACAATGA
|
|---|
| Protein sequence | MQRFKRFLPL ALIALSAIIF LIPPARPSID VVMGSEGEFL VEGQTQNFRN FYGFKEVERT
EQGVFRWTSG RGSIAFPYWE NVAAPLQLNL LLCGCRTDGQ TMPLTVTVNQ QALLKLNLSN
QWQWYHVQLP AGLTHPDHDI LLDLTSAEWR SPDQRTLGIV VQRIQIEALA AQPTQSFVAW
LGLALGLGLM VLWQIPVGFA GIVFGQWLLG VYGYQPQFLP KDFLLISLVF ANVIGWQCMR
NLPQLWRWVS LPLSSFWLIS SPQILGSWIL DDAFISFRYA ANLANGQGLV FNLDERVEGF
TNFLWTLLSS FSIKLGADPI LVTHATNLLL GMVIVVLSLQ LAHRLHQSSW MTLAIPLMLL
NLPLLLYTSL GSGMETALFC AGILATVLLA INQVWGYAAI ATTLTIMTRP DGMLLAGIIG
LLAIWQSWQT KHWQPLIRYA GILSLTFVPY WLARWWYYGY PLPNTFYAKV GGTAKQAERG
INYFIDFNRS YYLGWLGLGL GALASGLRWY QTKKVPILAI ITWAIVGLYT SYTISVGGDW
MPGYRFMVAT VPWFALLASW GISELWHYRR WLGASAIVAS SAILLLLLQP LQQERPLTVG
SAAWYETDVV NRYREVGLWI KASTPPETTL TVTAAGAIPY YAERTTIDAH GLTDLHIAHL
PIDPSKAGKP GHEKQDPDYV LRDRKPSLIP WVAAPMFTSH PLFDANYRLI EASGVEGRGI
RMFVRRDSGL FEQAQ
|
|---|
| |