Gene Haur_4261 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_4261 
Symbol 
ID5736115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp5436797 
End bp5437825 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content52% 
IMG OID641281416 
Producthypothetical protein 
Protein accessionYP_001547021 
Protein GI159900774 
COG category[K] Transcription 
COG ID[COG2378] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACACAA AACGACAAGC ACGCGGGATT AAGCGTTCAT CGGTGATGAA GGTGCAGCGT 
CAGATGTTGT TGCTGCGTTG TTTGGGCAGC GGCCCTAAAA CGAGTGATGC CTTAATTGAC
GAAGTTAATA GCCAAATGCT CGAAGCGTAT CCTAAAGCGG CCCGCGAGGC GCTCCGTCAC
GATCTACGGG CTTTGCGCGA GGTTTTTGGC TGTGTGATCG AATACACGGC TTCGGTGGGT
TATCGTTTGG TCAGCGTTGG CGATTTGGCC TTGCTCAATT TAACCAATGA TGAAATTGCG
GCGCTGCGCT TTCTTGATGC AACCTACACT GCCAATAGCA CCTTGCCTGA TCATCAACAG
GTGCGGCGCT TGGTCGAGCG GATAATCGAT TTCTTGCCAA TCGAGCGGCG TGGGGCTTTG
AATGTGGGCG AGCCAATTTT GCAGCAAGCT GGCCCTGTTG CGCCCTATGA ACATGATCCG
CAGATTATGC GTAGTTTGCG CAAAGCCCTC GCCCAGCGCC GCGAAATTCG TTTTCGCTAT
ACTTCAAGCC AACGTGATGG CGAGGAGACG CATCGGGTTG GGCCAGTTAA TATTTTTACT
CGCGATGGCC ATATGTATCT TTTGGGCTAT TGTTTTGATG GCCCGCAACA GATGGTCGAG
CGGGTTGGCC GTTATGTTGA TTATCGCATC GACTATATTA GCAAAAACAG CTTAACAATC
TTGCCACGGG TCTTGCCACC AGCCCTGCCC AAACGCCCAA CCTGGACAGT TAAGTATGAA
TTGCGCGATG TCGTTGCCCG CAATAAAAAA GTTGCCCACT GGTTTGCTGA TACTGATATT
CAATATCGTG ATGATGGCTC GGCCTTGGTG ACGGCCACGG TGCATAATCT CTGGCAAACG
CGCCAAATTC TGTTGCGCTA CTTGGAGAAT TGTCGTGTGC TAGAGCCACC CGAATTGATC
GATATGATGC GGGCGACGGC CCAGGGCTTG CGCGATTTGT ACCCACCTAG CACCAACGAA
ATTGGTTAA
 
Protein sequence
MNTKRQARGI KRSSVMKVQR QMLLLRCLGS GPKTSDALID EVNSQMLEAY PKAAREALRH 
DLRALREVFG CVIEYTASVG YRLVSVGDLA LLNLTNDEIA ALRFLDATYT ANSTLPDHQQ
VRRLVERIID FLPIERRGAL NVGEPILQQA GPVAPYEHDP QIMRSLRKAL AQRREIRFRY
TSSQRDGEET HRVGPVNIFT RDGHMYLLGY CFDGPQQMVE RVGRYVDYRI DYISKNSLTI
LPRVLPPALP KRPTWTVKYE LRDVVARNKK VAHWFADTDI QYRDDGSALV TATVHNLWQT
RQILLRYLEN CRVLEPPELI DMMRATAQGL RDLYPPSTNE IG