Gene Haur_4233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_4233 
Symbol 
ID5736087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp5395497 
End bp5396042 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content49% 
IMG OID641281388 
ProductPadR-like family transcriptional regulator 
Protein accessionYP_001546993 
Protein GI159900746 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGT TGACTCAGGC TGAGGCGGCG ATTTTAAGCT TGTTGGCAGA GCAGCCACGC 
TATGGCTATG AGCTCGAACA AATTATTCAG GCGCGGGGGA TGCGCTCGTG GACGGAAATT
GCTTTTTCGT CGATCTATTA TTTGCTCAAA AAGCTTGAGC AAGCGCAATT GGTCGCGGGC
GAAACATCTC AGGGCGATGG GCGACCATCA CGTATGGTCT ACAACATTCT ACCAAGTGGG
CGGGTTGCTT TGCAAGAGAG CCTACGCACA ATGCTGAGTG TGCCACAACA ACGCTATTCG
GCCTTGCTAT TGGGTATGGC CAATTTACCC TTGCTTGAGC TAAGCGAGGT TGTGGTGGCT
TTGGAGCAAT ATTGTGAGGA GTTACGGGCG CAAATCGGGC GGGTGCAACA ACGTCGTGCC
GAAGAACAAA CTCAATCTTG GCATATTCAA GGCTTATTTG ACTATACCGA AACCATGATT
CAGGCTGAAC ATGATTGGCT AACCAAGTAT TTAGCCCAGA TTCGCCAGCA ACTTAACCAA
GCTTAG
 
Protein sequence
MKKLTQAEAA ILSLLAEQPR YGYELEQIIQ ARGMRSWTEI AFSSIYYLLK KLEQAQLVAG 
ETSQGDGRPS RMVYNILPSG RVALQESLRT MLSVPQQRYS ALLLGMANLP LLELSEVVVA
LEQYCEELRA QIGRVQQRRA EEQTQSWHIQ GLFDYTETMI QAEHDWLTKY LAQIRQQLNQ
A