| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_4178 |
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| Symbol | |
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| ID | 5736040 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 5327805 |
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| End bp | 5329490 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641281333 |
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| Product | peptidase M3A and M3B thimet/oligopeptidase F |
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| Protein accession | YP_001546938 |
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| Protein GI | 159900691 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1164] Oligoendopeptidase F |
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| TIGRFAM ID | [TIGR02289] oligoendopeptidase, M3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0341575 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTTGA AGATTGACCC ACGCGATTGG GCCACAGTTC AGCCCTACTA CGATTCACTT
GCAGCCGAAG AGCTTACGGC TGCCAATGCA ACTGCTTGGT TAGGCCGTTG GAGTGAGTTG
GAAGCCCATT TGCAAGAATT CGGCTTCAAG GCCTATCGGG CGATGACCGA AAATACGCAG
GATCAGGCCG CCGAAGAGCT GTACCTCTAC ACAATTGAGG AGTTGACCCC GAAATCCAAG
GTTGCCGCCC AAACCTTGAA AGAAAAAATT TTGGCGCTTG ATCCAACGCT GTTGCCAGCC
AAAATGCAAG AAATGCTGCG GCGATTTCAT GCTGAAGCCA ATTTATTCCG CGAAGAAAAT
GTGCCACTAT TGACCGAAGT TGAGCGCCTG AGTGCGGAAT TTAGCAAATT GATGGGTGCA
ATGAGCGTTG AGTGGCAAGG CGAAACCCTG ACCATGCAAG CAGTCGTTAA GCTGTTTAGC
GACCCAGATC GCAGTGTGCG CGAAGCTGCA TTTAAGGCTT ATCATAGCCG TTTTTTGCAA
GACCGAGCAG CTTTCAACGA GATTTATCTC AAGCAACTTA AGCTTCGTCG CCAAATTGCC
ACCAATGCAG GTAAAGCCAG CTATTTGGAT TATGTCTGGG ATCTCTATGG GCGCTTCGAT
TATACGCCTG CCGATTGCCG CACCTTCCAC GATGCAATTG AACATGAAGT TGTGCCGTTG
GTTGAAAAAT GGTTGGCAGT CCATCAAGCC GAATTAGGCG TTGATAGCTT GCGACCATGG
GATATTTTGG TTGATTCGCA ATCACGCCCA GCTTTAACTC CATTCCAAAG CGCCGATGAA
CTCGAAAGCG TCTGCCAAAC AATCTTCGAT CGCGTTGATC CTGAACTGGG AGCGCAATAC
ACTCGCATGC GTGATGGCTG GCTTGATTTG GATTCACGGC CTGGTAAAGC ACCTGGTGGT
TATTGTGGCG GGATGTTTGT TTCCAAAGTG CCCTACATTT TTATGAATGC GGTTGGCACC
CATGATGATG TCCAAACCAT GTTGCACGAA GGTGGCCATG CTTTCCACTT TATGGAATCA
TCGGCAACCA ACGATTTGAT TTGGAATTAC GATGGGCCAA CTGAATTTTG TGAAGTCGCT
TCGATGGCGA TGGAATTGTT GGCAGCGCCC TATTTAGCCA ACGCTAAGGG CGGTTTCTAC
AGCGAAACTG ATGCCCGTCG TGCTCGTGCA GAGCATCTTT GGAGTATGCT CAAATTCTTG
CCCTATATGG CGACCGTCGA TGCCTTCCAA CATTGGGTCT ACATTGAAGC GCCTGAAGAT
GTAACGGCTG AGCAGCTTGA TGCCGTGTGG AAAGACCTCT ATCAGCGCTT TATGAGTGGG
GTGAATTGGG ATGGCTTCGA AGATGTACAG ACCACAGGCT GGCATCGCAA GCAGCATATT
TTTGAAGCTC CGCTCTATTA TGTAGAGTAT GGCTTAGCCC AATTGGGGGC GCAACAAGTT
TGGCGCAACG CTTTAGCTGA TCAAGCGCAG GCCGTAGCAC AATATCGCGC AGCCTTAGCC
TTGGGCAATA CCAAACCACT GAGTCAATTA TTTGCAGCGG CTGGGGCAAA ATTTGCCTTC
GATCGGGCAA CTGTCGGCGA ATTAGCCCGC TTAGTCGATC AGCATCTGAC CACACTCCGT
GATTAA
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| Protein sequence | MSLKIDPRDW ATVQPYYDSL AAEELTAANA TAWLGRWSEL EAHLQEFGFK AYRAMTENTQ
DQAAEELYLY TIEELTPKSK VAAQTLKEKI LALDPTLLPA KMQEMLRRFH AEANLFREEN
VPLLTEVERL SAEFSKLMGA MSVEWQGETL TMQAVVKLFS DPDRSVREAA FKAYHSRFLQ
DRAAFNEIYL KQLKLRRQIA TNAGKASYLD YVWDLYGRFD YTPADCRTFH DAIEHEVVPL
VEKWLAVHQA ELGVDSLRPW DILVDSQSRP ALTPFQSADE LESVCQTIFD RVDPELGAQY
TRMRDGWLDL DSRPGKAPGG YCGGMFVSKV PYIFMNAVGT HDDVQTMLHE GGHAFHFMES
SATNDLIWNY DGPTEFCEVA SMAMELLAAP YLANAKGGFY SETDARRARA EHLWSMLKFL
PYMATVDAFQ HWVYIEAPED VTAEQLDAVW KDLYQRFMSG VNWDGFEDVQ TTGWHRKQHI
FEAPLYYVEY GLAQLGAQQV WRNALADQAQ AVAQYRAALA LGNTKPLSQL FAAAGAKFAF
DRATVGELAR LVDQHLTTLR D
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